The scripts and input files that accompany this demo can be found in the
demos/protocol_captures directory of the Rosetta weekly releases.
This is a protocol capture, and represents the protocol at a fixed point in time. It may not work with the current version of Rosetta.
rosetta svn revision 33365 The standard relax protocols can be used. The mtssl parameter file must be provided. The command line below will relax the t4-lysozyme double mutant provided in the input directory. ../bin/relax.linuxgccrelease -database $PATH_TO_ROSETTA_DATABASE -in:file:s input/lysozyme_start_mtssl_mutant.pdb -out:file:fullatom -in:file:extra_res_fa ../input/R1A.params -out:prefix relax_ -run::constant_seed -run::jran 12345 -nstruct 1 >& relax.log