The scripts and input files that accompany this demo can be found in the demos/public directory of the Rosetta weekly releases.

KEYWORDS: NUCLEIC_ACIDS RNA DENOVO STRUCTURE_PREDICTION FARFAR2

Purpose

This code is intended to give three-dimensional de novo models of whole RNAs folds, whether single or multi stranded, with the option to include template starting structures.

This test case involves a riboswitch that binds S-adenosyl methionine.

See the documentation for RNA 3D structure modeling for more information. 

$> $ROSETTA3/bin/rna_denovo.default.linuxgccrelease @flags
where $ROSETTA3=path-to-Rosetta/main/source