SameSequenceGrouper.hh File Reference

#include <protocols/match/output/SameSequenceGrouper.fwd.hh>
#include <protocols/match/downstream/DownstreamBuilder.fwd.hh>
#include <protocols/match/output/MatchGrouper.hh>
#include <protocols/match/output/UpstreamHitCacher.fwd.hh>
#include <protocols/match/Hit.fwd.hh>
#include <core/id/AtomID.fwd.hh>
#include <utility/vector1.hh>
#include <map>
#include <utility/OrderedTuple.fwd.hh>

Classes
class	protocols::match::output::SameSequenceGrouper
	Class to group matches that represent the same amino acids at the same launch points. E.g. Two matches that both put a cys at launch point #33, a ser a launch point #42 and another ser at launch point #80 would be grouped together – even if they are different rotamers. More...
class	protocols::match::output::SameSequenceAndDSPositionGrouper
	class that groups based on same sequence and proximity of the downstream object (based on rms ) NOTE: right now only the downstream position according to the first geomcst id upstream residue is taken into account More...

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::match
	protocols::match::output

Detailed Description

Author

Alex Zanghellini (zangh.nosp@m.ell@.nosp@m.u.was.nosp@m.hing.nosp@m.ton.e.nosp@m.du)

Andrew Leaver-Fay (aleav.nosp@m.erfa.nosp@m.y@gma.nosp@m.il.c.nosp@m.om), porting to mini