| align_to_ss_only_ | protocols::hybridization::InsertChunkMover | private |
| align_trial_counter_ | protocols::hybridization::InsertChunkMover | private |
| anchor_insert_only_ | protocols::hybridization::InsertChunkMover | private |
| apply(core::pose::Pose &pose) | protocols::hybridization::InsertChunkMover | virtual |
| protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| atom_map_ | protocols::hybridization::InsertChunkMover | private |
| check_overlap(core::pose::Pose &pose) | protocols::hybridization::InsertChunkMover | |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const | protocols::moves::Mover | virtual |
| copy_ss_torsion_only_ | protocols::hybridization::InsertChunkMover | private |
| create() | protocols::moves::Mover | virtual |
| Filters_map typedef | protocols::moves::Mover | |
| fresh_instance() const | protocols::moves::Mover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_local_sequence_mapping(core::pose::Pose &pose, int registry_shift=0, Size MAX_TRIAL=100) | protocols::hybridization::InsertChunkMover | |
| get_name() const | protocols::hybridization::InsertChunkMover | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_self_ptr() const | protocols::moves::Mover | inline |
| get_self_ptr() | protocols::moves::Mover | inline |
| get_self_weak_ptr() const | protocols::moves::Mover | inline |
| get_self_weak_ptr() | protocols::moves::Mover | inline |
| get_type() const | protocols::moves::Mover | inline |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| init() | protocols::hybridization::InsertChunkMover | |
| InsertChunkMover() | protocols::hybridization::InsertChunkMover | |
| jump_number_ | protocols::hybridization::InsertChunkMover | private |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| name() | protocols::moves::Mover | inlinestatic |
| operator=(Mover const &other) | protocols::moves::Mover | |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose) | protocols::moves::Mover | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| register_options() | protocols::moves::Mover | inlinestatic |
| registry_shift_ | protocols::hybridization::InsertChunkMover | private |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset_status() | protocols::moves::Mover | |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| secstruct_ | protocols::hybridization::InsertChunkMover | private |
| seqpos_aligned_start_ | protocols::hybridization::InsertChunkMover | private |
| seqpos_aligned_stop_ | protocols::hybridization::InsertChunkMover | private |
| seqpos_start_ | protocols::hybridization::InsertChunkMover | private |
| seqpos_stop_ | protocols::hybridization::InsertChunkMover | private |
| sequence_alignment_ | protocols::hybridization::InsertChunkMover | private |
| sequence_alignment_local_ | protocols::hybridization::InsertChunkMover | private |
| set_aligned_chunk(core::pose::Pose const &pose, Size const jump_number, bool anchor_insert_only_in) | protocols::hybridization::InsertChunkMover | |
| set_bb_xyz_aligned(core::pose::Pose &pose) | protocols::hybridization::InsertChunkMover | |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_registry_shift(int registry_shift) | protocols::hybridization::InsertChunkMover | |
| set_template(core::pose::PoseCOP template_pose, core::Size template_id, std::map< core::Size, core::Size > const &sequence_alignment) | protocols::hybridization::InsertChunkMover | |
| set_type(std::string const &setting) | protocols::moves::Mover | inline |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| Strings typedef | protocols::moves::Mover | |
| success() | protocols::hybridization::InsertChunkMover | inline |
| success_ | protocols::hybridization::InsertChunkMover | private |
| TagCOP typedef | protocols::moves::Mover | |
| template_id_ | protocols::hybridization::InsertChunkMover | private |
| template_pose_ | protocols::hybridization::InsertChunkMover | private |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| trial_counter(Size ires) | protocols::hybridization::InsertChunkMover | |
| type() const | protocols::moves::Mover | inline |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| ~InsertChunkMover() | protocols::hybridization::InsertChunkMover | |
| ~Mover() | protocols::moves::Mover | virtual |
1.8.7