SmotifFeatures.cc File Reference

Calculate 4 geometric values used to classify smotifs. Reference (http://www.ncbi.nlm.nih.gov/pubmed/20421995) More...

#include <protocols/features/SmotifFeatures.hh>
#include <basic/Tracer.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <core/types.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <basic/database/sql_utils.hh>
#include <basic/database/schema_generator/PrimaryKey.hh>
#include <basic/database/schema_generator/ForeignKey.hh>
#include <basic/database/schema_generator/Column.hh>
#include <basic/database/schema_generator/Schema.hh>
#include <basic/database/schema_generator/Constraint.hh>
#include <numeric/xyzMatrix.hh>
#include <numeric/xyzVector.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/PCA.hh>
#include <numeric/xyzVector.io.hh>
#include <utility/sql_database/DatabaseSessionManager.hh>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::features

Functions
static thread_local basic::Tracer	protocols::features::TR ("protocols.features.SmotifFeatures")

Detailed Description

Calculate 4 geometric values used to classify smotifs. Reference (http://www.ncbi.nlm.nih.gov/pubmed/20421995)

Author

Tim Jacobs