ConsensusLoopDesign.hh File Reference

Restrict loop residue identities to those commonly found in nature. More...

#include <protocols/denovo_design/task_operations/ConsensusLoopDesign.fwd.hh>
#include <core/conformation/Residue.fwd.hh>
#include <core/pack/task/residue_selector/ResidueSelector.fwd.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/scoring/packstat/compute_sasa.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/pack/task/operation/TaskOperation.hh>
#include <core/types.hh>
#include <basic/datacache/DataMap.fwd.hh>
#include <utility/tag/Tag.fwd.hh>

Classes
struct	protocols::denovo_design::task_operations::SurroundingSS
struct	protocols::denovo_design::task_operations::LoopInfo
class	protocols::denovo_design::task_operations::ConsensusLoopDesignOperation

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::denovo_design
	protocols::denovo_design::task_operations

Typedefs
typedef std::list< std::string >	protocols::denovo_design::task_operations::LoopAAs
typedef std::map< std::string, LoopAAs >	protocols::denovo_design::task_operations::AbegoToSequenceMap
typedef std::map < SurroundingSS, AbegoToSequenceMap >	protocols::denovo_design::task_operations::ConsensusSequenceTable
typedef utility::vector1 < LoopInfo >	protocols::denovo_design::task_operations::LoopInfoVec

Functions
std::ostream &	protocols::denovo_design::task_operations::operator<< (std::ostream &os, LoopInfo const &info)

Detailed Description

Restrict loop residue identities to those commonly found in nature.

Author

Tom Linsky (tlins.nosp@m.ky@u.nosp@m.w.edu)