SameStrand.hh File Reference

secondary structure will hold statistics about secondary structure predictions sources can be from More...

#include <protocols/jumping/SameStrand.fwd.hh>
#include <core/types.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <core/fragment/SecondaryStructure.fwd.hh>

Classes
class	protocols::jumping::SameStrand
	tiny helper class that knows the relative fractions of secondary structure L,H,E so far these fractions can be computed from a FragSet other input strategies are conceivable but not implemented, yet: eg. psipred files, a bunch of poses, More...

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::jumping

Functions
std::ostream &	protocols::jumping::operator<< (std::ostream &os, SameStrand const &t)
	output operator More...

Detailed Description

secondary structure will hold statistics about secondary structure predictions sources can be from

• fragments
• psipred files ? other stuff

from converting jumping_pairings.cc of rosetta++ into mini

Author

Oliver Lange