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Rosetta
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This is the complete list of members for TCDock, including all inherited members.
| __dock_base__(int icmp2, int icmp1, int iori, Real &dori, Real &dcmp2, Real &dcmp1, Real &icbc, Real &cmp2cbc, Real &cmp1cbc, bool cache=true) | TCDock | inline |
| __dock_base__(int icmp2, int icmp1, int iori, Real &dori, Real &dcmp2, Real &dcmp1, Real &rscore, Real &cmp2cbc, Real &cmp1cbc, bool cache=true) | TCDock | inline |
| abort_ | TCDock | |
| alpha_ | TCDock | |
| arch() const | TCDock | inline |
| arch_ | TCDock | private |
| axismap_ | TCDock | |
| clashmap1_ | TCDock | |
| clashmap2_ | TCDock | |
| cmp1_ | TCDock | |
| cmp1axs_ | TCDock | |
| cmp1cbneg_ | TCDock | |
| cmp1cbpos_ | TCDock | |
| cmp1cbs_ | TCDock | |
| cmp1cbs_ | TCDock | |
| cmp1dianeg_ | TCDock | |
| cmp1diapos_ | TCDock | |
| cmp1dsneg_ | TCDock | |
| cmp1dspos_ | TCDock | |
| cmp1in_ | TCDock | |
| cmp1mnneg_ | TCDock | |
| cmp1mnpos_ | TCDock | |
| cmp1name_ | TCDock | |
| cmp1nangle_ | TCDock | |
| cmp1nsub_ | TCDock | |
| cmp1olig_ | TCDock | |
| cmp1pts_ | TCDock | |
| cmp1pts_ | TCDock | |
| cmp1scale_ | TCDock | |
| cmp1type_ | TCDock | |
| cmp1wtmap_ | TCDock | |
| cmp1wts_ | TCDock | |
| cmp2_ | TCDock | |
| cmp2axs_ | TCDock | |
| cmp2cbneg_ | TCDock | |
| cmp2cbpos_ | TCDock | |
| cmp2cbs_ | TCDock | |
| cmp2cbs_ | TCDock | |
| cmp2dianeg_ | TCDock | |
| cmp2diapos_ | TCDock | |
| cmp2dsneg_ | TCDock | |
| cmp2dspos_ | TCDock | |
| cmp2in_ | TCDock | |
| cmp2mnneg_ | TCDock | |
| cmp2mnpos_ | TCDock | |
| cmp2name_ | TCDock | |
| cmp2nangle_ | TCDock | |
| cmp2nsub_ | TCDock | |
| cmp2olig_ | TCDock | |
| cmp2pts_ | TCDock | |
| cmp2pts_ | TCDock | |
| cmp2scale_ | TCDock | |
| cmp2type_ | TCDock | |
| cmp2wtmap_ | TCDock | |
| cmp2wts_ | TCDock | |
| conf_count_ | TCDock | |
| dock_get_geom(int icmp2, int icmp1, int iori, Real &dori, Real &dcmp2, Real &dcmp1, Real &icbc, Real &cmp2cbc, Real &cmp1cbc) | TCDock | inline |
| dock_get_geom(int icmp2, int icmp1, int iori, Real &dori, Real &dcmp2, Real &dcmp1, Real &rscore, Real &cmp2cbc, Real &cmp1cbc) | TCDock | inline |
| dock_no_score(int icmp2, int icmp1, int iori) | TCDock | inline |
| dock_no_score(int icmp2, int icmp1, int iori) | TCDock | inline |
| dock_score(int icmp2, int icmp1, int iori, Real &icbc, Real &cmp2cbc, Real &cmp1cbc) | TCDock | inline |
| dock_score(int icmp2, int icmp1, int iori) | TCDock | inline |
| dock_score(int icmp2, int icmp1, int iori, Real &rscore, Real &cmp2cbc, Real &cmp1cbc) | TCDock | inline |
| dock_score(int icmp2, int icmp1, int iori) | TCDock | inline |
| dump_onecomp() | TCDock | inline |
| dump_onecomp() | TCDock | inline |
| dump_pdb(int icmp2, int icmp1, int iori, string fname, int idx, bool dumpsym=true, bool sepcomp=true, bool termini=true) | TCDock | inline |
| dump_pdb(int icmp2, int icmp1, int iori, string fname, bool reverse, bool dumpsym) | TCDock | inline |
| dump_top_hits(vector1< LMAX > &local_maxima) | TCDock | inline |
| final_sfxn_ | TCDock | |
| gather_hits(vector1< LMAX > &local_maxima, bool const &reverse) | TCDock | inline |
| get_best_sub1_contact_delta_rotations(Real icmp1, Real dcmp1, Real icmp2, Real dcmp2, Real &out_delta_ang1, Real &out_delta_ang2) | TCDock | inline |
| get_best_sub1_contact_delta_rotations(Real icmp1, Real dcmp1, Real icmp2, Real dcmp2, Real &out_delta_ang1, Real &out_delta_ang2) | TCDock | inline |
| get_cmp1(Real acmp1, vector1< Vecf > &pts, vector1< Vecf > &cbs) | TCDock | inline |
| get_cmp1(Real acmp1, vector1< Vec > &pts, vector1< Vec > &cbs) | TCDock | inline |
| get_cmp2(Real acmp2, vector1< Vecf > &pts, vector1< Vecf > &cbs) | TCDock | inline |
| get_cmp2(Real acmp2, vector1< Vec > &pts, vector1< Vec > &cbs) | TCDock | inline |
| get_contacts_by_component(Real const &ang1, Real const &ang2, Real const &dis1, Real const &dis2, int &nresiface, int &nresiface0, int &nresiface1, int &nresiface2, int &ncontacts, int &ncontacts0, int &ncontacts1, int &ncontacts2, Real &nweighted, Real &nweighted0, Real &nweighted1, Real &nweighted2) | TCDock | inline |
| get_moments(vector1< Vec > const &pts, Real &m1, Real &m2, Real &m3, Real &m4) | TCDock | inline |
| gradii | TCDock | |
| gscore | TCDock | |
| init(bool reverse) | TCDock | inline |
| justone(int icmp1, int icmp2, int iori) | TCDock | inline |
| lnscore_ | TCDock | |
| make_dimer(core::pose::Pose &pose) | TCDock | inline |
| make_pentamer(core::pose::Pose &pose) | TCDock | inline |
| make_tetramer(core::pose::Pose &pose) | TCDock | inline |
| make_trimer(core::pose::Pose &pose) | TCDock | inline |
| mhscore_ | TCDock | |
| min_termini_dis(Real d1, Real a1, Real d2, Real a2) | TCDock | inline |
| min_termini_dis(Real d1, Real a1, Real d2, Real a2) | TCDock | inline |
| min_termini_proj(Real a1, Real a2, Vec sicaxis) | TCDock | inline |
| min_termini_proj(Real a1, Real a2, Vec sicaxis) | TCDock | inline |
| num_threads() | TCDock | inline |
| num_threads() | TCDock | inline |
| precompute_intra() | TCDock | inline |
| precompute_intra() | TCDock | inline |
| rigid_sfxn_ | TCDock | |
| run() | TCDock | inline |
| run() | TCDock | inline |
| sic_ | TCDock | |
| sin_alpha_ | TCDock | |
| start_time_ | TCDock | |
| swap_axis(vector1< Vecf > &pts, string type) | TCDock | inline |
| swap_axis_rotation(string type) | TCDock | inline |
| symtype_ | TCDock | |
| tan_alpha_ | TCDock | |
| TCDock(Pose const &pose1, Pose const &pose2, string cmp1pdb, string cmp2pdb, string cmp1type, string cmp2type) | TCDock | inline |
| TCDock(ArchCOP _arch, Pose const &_pose1, Pose const &_pose2, string _cmp1pdb, string _cmp2pdb) | TCDock | inline |
| termini_score(Real d1, Real a1, Real d2, Real a2) | TCDock | inline |
| termini_score(Real d1, Real a1, Real d2, Real a2, Real &td) | TCDock | inline |
| thread_num() | TCDock | inline |
| thread_num() | TCDock | inline |
| xform_out_ | TCDock | |
| ~TCDock() | TCDock | inlinevirtual |
| ~TCDock() | TCDock | inlinevirtual |
1.9.1