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Rosetta
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This is the complete list of members for FragMonteCarlo, including all inherited members.
| assigned_frags_ | FragMonteCarlo | private |
| cal_frag_score(int candidate_fragidx) | FragMonteCarlo | private |
| check_file_exists(std::string file_name) | FragMonteCarlo | inline |
| fragid_to_fragfn(FragID fragid) | FragMonteCarlo | inline |
| fragidx_to_fragid_ | FragMonteCarlo | private |
| FragMonteCarlo(core::Real wt_dens_in, core::Real wt_overlap_in, core::Real wt_closab_in, core::Real wt_clash_in, core::Real null_frag_score_in_) | FragMonteCarlo | inline |
| get_assigned_frags() | FragMonteCarlo | inline |
| get_candidate_frags(core::Size pos) | FragMonteCarlo | inline |
| initialize_frag_assignment(core::Size init_type) | FragMonteCarlo | |
| isNullFrag(int fragidx) | FragMonteCarlo | inline |
| isOverlapping(int i_fragidx, int j_fragidx) | FragMonteCarlo | |
| load_scorefiles(std::string fragidx_file, std::string scorefile_dens, std::string scorefile_overlap, std::string scorefile_nonoverlap) | FragMonteCarlo | |
| n_total_frags_ | FragMonteCarlo | private |
| n_total_rsds_ | FragMonteCarlo | private |
| null_frag_score_ | FragMonteCarlo | private |
| pos_to_fragcands_ | FragMonteCarlo | private |
| report_results(int model_ctr=0, int runid=0) | FragMonteCarlo | |
| report_score(core::Real temp=0.0) | FragMonteCarlo | |
| rmsd_table_ | FragMonteCarlo | private |
| run(bool verbose=false, core::Real sa_start_temp=1000.0, core::Real sa_end_temp=1.0, core::Size sa_nsteps=25, core::Size mc_nsteps=1500) | FragMonteCarlo | |
| scores_1b_ | FragMonteCarlo | private |
| scores_2b_ | FragMonteCarlo | private |
| updated_covered_rsds(utility::vector1< int > &covered_rsds, FragID const fragidx) | FragMonteCarlo | |
| wt_clash_ | FragMonteCarlo | private |
| wt_closab_ | FragMonteCarlo | private |
| wt_dens_ | FragMonteCarlo | private |
| wt_overlap_ | FragMonteCarlo | private |
1.9.1