Rosetta
Classes | Namespaces | Functions | Variables
PyMOL-Rosetta-relay-client.python2.py File Reference

Classes

class  PyMOL-Rosetta-relay-client.StartUpError
 Exceptions. More...
 
class  PyMOL-Rosetta-relay-client.PR_UDPServer
 
class  PyMOL-Rosetta-relay-client.PR_PyMOLServer
 
class  PyMOL-Rosetta-relay-client.XYZCoord
 
class  PyMOL-Rosetta-relay-client.PlanePoints
 
class  PyMOL-Rosetta-relay-client.Matrix
 
class  PyMOL-Rosetta-relay-client.SecretInputDialog
 

Namespaces

 PyMOL-Rosetta-relay-client
 

Functions

def PyMOL-Rosetta-relay-client.add_vectors (v1, v2)
 
def PyMOL-Rosetta-relay-client.scalar_multiply (v, n)
 
def PyMOL-Rosetta-relay-client.normalize (normal)
 
def PyMOL-Rosetta-relay-client.rotation_matrix_radians (axis, theta)
 
def PyMOL-Rosetta-relay-client.multiply_matrix (matrix, vector)
 
def PyMOL-Rosetta-relay-client.rotate_vector (vector, theta, axis)
 
def PyMOL-Rosetta-relay-client.compute_plane_positions (center, normal, thickness, rg, npoints=4)
 
def PyMOL-Rosetta-relay-client.draw_membrane_planes (plane_points, normal_vector)
 
def PyMOL-Rosetta-relay-client.make_axis (name, ends, dr, scale=False, axis_color='', num=0)
 Graphing methods. More...
 
def PyMOL-Rosetta-relay-client.scale_axes (name='x_axis or y_axis or z_axis')
 
def PyMOL-Rosetta-relay-client.get_ends (data)
 
def PyMOL-Rosetta-relay-client.extract_coords (name)
 
def PyMOL-Rosetta-relay-client.make_data (name, x_array, y_array, z_array, data_color='red')
 
def PyMOL-Rosetta-relay-client.add_point (name, point, connect='', rescale=False, scale=False, axis_color='', num=0, banner='')
 
def PyMOL-Rosetta-relay-client.rescale_cartesian (data, scale, axis_color, num)
 
def PyMOL-Rosetta-relay-client.connect_points (name, color='red')
 
def PyMOL-Rosetta-relay-client.plot3d (name, x_array, y_array, z_array=[], connect='red', scale=True, axis_color='blue', num=0)
 
def PyMOL-Rosetta-relay-client.set_spectrum (low='blue', high='red')
 PyMOL spectrum coloring. More...
 
def PyMOL-Rosetta-relay-client.main (ip, port)
 Main PyMOLPyRosettaServer.py routines. More...
 
def PyMOL-Rosetta-relay-client.start_rosetta_server (ip='', port=65000)
 
def PyMOL-Rosetta-relay-client.tcp_client_main (ip, port, secret, verbose)
 Create our own color spectrum for PyMOL. More...
 
def PyMOL-Rosetta-relay-client.connect_to_rosetta_tcp_server (ip, port, secret, verbose=False)
 

Variables

 PyMOL-Rosetta-relay-client._my_secret_ = None
 
 PyMOL-Rosetta-relay-client._default_relay_server_
 
 PyMOL-Rosetta-relay-client._default_port_
 
bool PyMOL-Rosetta-relay-client._terminate_ = False
 
dictionary PyMOL-Rosetta-relay-client.COLOR_LIB
 Constants. More...
 
dictionary PyMOL-Rosetta-relay-client.X11_COLORS
 
 PyMOL-Rosetta-relay-client.secret
 
 PyMOL-Rosetta-relay-client.dialog = SecretInputDialog()