D090_Ala_scan.py File Reference

Namespaces
	demo.D090_Ala_scan

Functions
def	demo.D090_Ala_scan.scanning (pdb_filename, partners, mutant_aa='A', interface_cutoff=8.0, output=False, trials=1, trial_output='')
	Methods. More...
def	demo.D090_Ala_scan.interface_ddG (pose, mutant_position, mutant_aa, movable_jumps, scorefxn='', cutoff=8.0, out_filename='')
def	demo.D090_Ala_scan.mutate_residue (pose, mutant_position, mutant_aa, pack_radius=0.0, pack_scorefxn='')
def	demo.D090_Ala_scan.calc_binding_energy (pose, scorefxn, center, cutoff=8.0)
def	demo.D090_Ala_scan.scanning_analysis (trial_output)

Variables
	demo.D090_Ala_scan.extra_options
	demo.D090_Ala_scan.parser = optparse.OptionParser()
	INTERPRETING RESULTS. More...
	demo.D090_Ala_scan.dest
	demo.D090_Ala_scan.default
	demo.D090_Ala_scan.help
	demo.D090_Ala_scan.options
	demo.D090_Ala_scan.args
	demo.D090_Ala_scan.pdb_filename = options.pdb_filename
	demo.D090_Ala_scan.partners = options.partners
	demo.D090_Ala_scan.mutant_aa = options.mutant_aa
	demo.D090_Ala_scan.interface_cutoff = float(options.interface_cutoff)
	demo.D090_Ala_scan.output = bool(options.output)
	demo.D090_Ala_scan.trials = int(options.trials)
	demo.D090_Ala_scan.trial_output = options.trial_output