mp.OptionKeys.gen.hh File Reference

basic::options::OptionKeys collection More...

#include <basic/options/keys/OptionKeys.hh>

Namespaces
	basic
	Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input.
	basic::options
	basic::options::OptionKeys
	basic::options::OptionKeys::mp
	basic::options::OptionKeys::mp::lipids
	basic::options::OptionKeys::mp::viewer
	basic::options::OptionKeys::mp::visualize
	basic::options::OptionKeys::mp::scoring
	basic::options::OptionKeys::mp::setup
	basic::options::OptionKeys::mp::lipid_acc
	basic::options::OptionKeys::mp::geo
	basic::options::OptionKeys::mp::transform
	basic::options::OptionKeys::mp::assembly
	basic::options::OptionKeys::mp::dock
	basic::options::OptionKeys::mp::quickrelax
	basic::options::OptionKeys::mp::mutate_relax
	basic::options::OptionKeys::mp::benchmark
	basic::options::OptionKeys::mp::benchmark::ideal_helix
	basic::options::OptionKeys::mp::benchmark::tilt_angle
	basic::options::OptionKeys::mp::output

Variables
BooleanOptionKey const	basic::options::OptionKeys::mp::mp
BooleanOptionKey const	basic::options::OptionKeys::mp::restore_lazaridis_imm_behavior
RealOptionKey const	basic::options::OptionKeys::mp::thickness
RealOptionKey const	basic::options::OptionKeys::mp::membrane_core
RealOptionKey const	basic::options::OptionKeys::mp::steepness
StringOptionKey const	basic::options::OptionKeys::mp::geometry
RealVectorOptionKey const	basic::options::OptionKeys::mp::center_start
RealOptionKey const	basic::options::OptionKeys::mp::center_delta
RealOptionKey const	basic::options::OptionKeys::mp::center_search_cycles
RealVectorOptionKey const	basic::options::OptionKeys::mp::normal_start
RealOptionKey const	basic::options::OptionKeys::mp::normal_angle_start
RealOptionKey const	basic::options::OptionKeys::mp::normal_angle_delta
RealOptionKey const	basic::options::OptionKeys::mp::normal_search_cycles
RealOptionKey const	basic::options::OptionKeys::mp::chain_normal_angle_max
RealOptionKey const	basic::options::OptionKeys::mp::pose_normal_angle_max
BooleanOptionKey const	basic::options::OptionKeys::mp::no_interpolate_Mpair
BooleanOptionKey const	basic::options::OptionKeys::mp::Hbond_depth_correction
BooleanOptionKey const	basic::options::OptionKeys::mp::TMprojection
RealOptionKey const	basic::options::OptionKeys::mp::wt_TMprojection
BooleanOptionKey const	basic::options::OptionKeys::mp::non_helix
RealOptionKey const	basic::options::OptionKeys::mp::wt_non_helix
BooleanOptionKey const	basic::options::OptionKeys::mp::termini
RealOptionKey const	basic::options::OptionKeys::mp::wt_termini
BooleanOptionKey const	basic::options::OptionKeys::mp::secstruct
RealOptionKey const	basic::options::OptionKeys::mp::wt_secstruct
BooleanOptionKey const	basic::options::OptionKeys::mp::spanning
RealOptionKey const	basic::options::OptionKeys::mp::wt_spanning
BooleanOptionKey const	basic::options::OptionKeys::mp::lipids::lipids
StringOptionKey const	basic::options::OptionKeys::mp::lipids::composition
RealOptionKey const	basic::options::OptionKeys::mp::lipids::temperature
BooleanOptionKey const	basic::options::OptionKeys::mp::lipids::has_pore
BooleanOptionKey const	basic::options::OptionKeys::mp::viewer::viewer
RealOptionKey const	basic::options::OptionKeys::mp::viewer::thickness
IntegerOptionKey const	basic::options::OptionKeys::mp::viewer::num_points
BooleanOptionKey const	basic::options::OptionKeys::mp::visualize::visualize
BooleanOptionKey const	basic::options::OptionKeys::mp::visualize::embedding
RealOptionKey const	basic::options::OptionKeys::mp::visualize::spacing
RealOptionKey const	basic::options::OptionKeys::mp::visualize::width
RealOptionKey const	basic::options::OptionKeys::mp::visualize::thickness
RealOptionKey const	basic::options::OptionKeys::mp::visualize::plane_radius
BooleanOptionKey const	basic::options::OptionKeys::mp::scoring::scoring
BooleanOptionKey const	basic::options::OptionKeys::mp::scoring::hbond
BooleanOptionKey const	basic::options::OptionKeys::mp::scoring::analytic_membetable_evaluation
BooleanOptionKey const	basic::options::OptionKeys::mp::setup::setup
StringVectorOptionKey const	basic::options::OptionKeys::mp::setup::spanfiles
StringOptionKey const	basic::options::OptionKeys::mp::setup::span1
StringOptionKey const	basic::options::OptionKeys::mp::setup::span2
BooleanOptionKey const	basic::options::OptionKeys::mp::setup::spans_from_structure
StringOptionKey const	basic::options::OptionKeys::mp::setup::lipsfile
RealVectorOptionKey const	basic::options::OptionKeys::mp::setup::center
RealVectorOptionKey const	basic::options::OptionKeys::mp::setup::normal
RealOptionKey const	basic::options::OptionKeys::mp::setup::membrane_rsd
BooleanOptionKey const	basic::options::OptionKeys::mp::setup::transform_into_membrane
BooleanOptionKey const	basic::options::OptionKeys::mp::setup::position_from_topo
BooleanOptionKey const	basic::options::OptionKeys::mp::setup::optimize1
BooleanOptionKey const	basic::options::OptionKeys::mp::setup::optimize2
BooleanOptionKey const	basic::options::OptionKeys::mp::lipid_acc::lipid_acc
RealOptionKey const	basic::options::OptionKeys::mp::lipid_acc::angle_cutoff
RealOptionKey const	basic::options::OptionKeys::mp::lipid_acc::slice_width
RealOptionKey const	basic::options::OptionKeys::mp::lipid_acc::shell_radius
RealOptionKey const	basic::options::OptionKeys::mp::lipid_acc::dist_cutoff
BooleanOptionKey const	basic::options::OptionKeys::mp::lipid_acc::tm_alpha
BooleanOptionKey const	basic::options::OptionKeys::mp::geo::geo
RealOptionKey const	basic::options::OptionKeys::mp::geo::bicelle_radius
RealOptionKey const	basic::options::OptionKeys::mp::geo::vesicle_radius
RealOptionKey const	basic::options::OptionKeys::mp::geo::double_vesicle_inner_radius
RealOptionKey const	basic::options::OptionKeys::mp::geo::double_vesicle_distance
BooleanOptionKey const	basic::options::OptionKeys::mp::transform::transform
BooleanOptionKey const	basic::options::OptionKeys::mp::transform::optimize_embedding
BooleanOptionKey const	basic::options::OptionKeys::mp::assembly::assembly
IntegerOptionKey const	basic::options::OptionKeys::mp::assembly::TM_pose_number
StringVectorOptionKey const	basic::options::OptionKeys::mp::assembly::poses
BooleanOptionKey const	basic::options::OptionKeys::mp::dock::dock
StringOptionKey const	basic::options::OptionKeys::mp::dock::weights_cen
StringOptionKey const	basic::options::OptionKeys::mp::dock::weights_fa
BooleanOptionKey const	basic::options::OptionKeys::mp::dock::lowres
BooleanOptionKey const	basic::options::OptionKeys::mp::dock::allow_flips
BooleanOptionKey const	basic::options::OptionKeys::mp::dock::flexible_bb
BooleanOptionKey const	basic::options::OptionKeys::mp::dock::flexible_sc
RealOptionKey const	basic::options::OptionKeys::mp::dock::slide_threshold
BooleanOptionKey const	basic::options::OptionKeys::mp::quickrelax::quickrelax
RealOptionKey const	basic::options::OptionKeys::mp::quickrelax::angle_max
StringOptionKey const	basic::options::OptionKeys::mp::quickrelax::nmoves
BooleanOptionKey const	basic::options::OptionKeys::mp::quickrelax::repack_again
BooleanOptionKey const	basic::options::OptionKeys::mp::mutate_relax::mutate_relax
StringVectorOptionKey const	basic::options::OptionKeys::mp::mutate_relax::mutation
StringOptionKey const	basic::options::OptionKeys::mp::mutate_relax::mutant_file
IntegerOptionKey const	basic::options::OptionKeys::mp::mutate_relax::nmodels
BooleanOptionKey const	basic::options::OptionKeys::mp::mutate_relax::repack_mutation_only
RealOptionKey const	basic::options::OptionKeys::mp::mutate_relax::repack_radius
BooleanOptionKey const	basic::options::OptionKeys::mp::mutate_relax::relax
BooleanOptionKey const	basic::options::OptionKeys::mp::benchmark::benchmark
BooleanOptionKey const	basic::options::OptionKeys::mp::benchmark::ideal_helix::ideal_helix
RealOptionKey const	basic::options::OptionKeys::mp::benchmark::ideal_helix::helix_start
RealOptionKey const	basic::options::OptionKeys::mp::benchmark::ideal_helix::helix_end
BooleanOptionKey const	basic::options::OptionKeys::mp::benchmark::tilt_angle::tilt_angle
StringOptionKey const	basic::options::OptionKeys::mp::benchmark::tilt_angle::output
BooleanOptionKey const	basic::options::OptionKeys::mp::output::output
BooleanOptionKey const	basic::options::OptionKeys::mp::output::normalize_to_thk
BooleanOptionKey const	basic::options::OptionKeys::mp::output::output_mem_to_pdb

Detailed Description

basic::options::OptionKeys collection

Author

Stuart G. Mentzer (Stuar.nosp@m.t_Me.nosp@m.ntzer.nosp@m.@obj.nosp@m.exx.c.nosp@m.om)

James M. Thompson (tex@u.nosp@m..was.nosp@m.hingt.nosp@m.on.e.nosp@m.du)