This is the complete list of members for GlycanClashCheckMover, including all inherited members.
apply(core::pose::Pose &pose) override | GlycanClashCheckMover | inline |
branch_it_type typedef | GlycanClashCheckMover | private |
branch_point_resnums_ | GlycanClashCheckMover | private |
branch_residues_ | GlycanClashCheckMover | private |
branches_ | GlycanClashCheckMover | private |
calculate_atom_clashes(std::string const &clash_type, const core::pose::Pose &pose, std::string branch, core::Size const &glycan_resnum, utility::vector1< core::Size > other_resnums, std::map< std::string, utility::vector1< core::Size > > &atom_clashes, std::map< std::string, utility::vector1< core::Size > > &soft_atom_clashes) | GlycanClashCheckMover | inlineprivate |
chain_nums_ | GlycanClashCheckMover | private |
chain_resnums_ | GlycanClashCheckMover | private |
chains_ | GlycanClashCheckMover | private |
clone() const override | GlycanClashCheckMover | inline |
fresh_instance() const override | GlycanClashCheckMover | inline |
get_name() const override | GlycanClashCheckMover | inline |
glycan_chain_res_atomic_clashes_ | GlycanClashCheckMover | private |
glycan_chain_res_soft_atomic_clashes_ | GlycanClashCheckMover | private |
glycan_glycan_res_atomic_clashes_ | GlycanClashCheckMover | private |
glycan_glycan_res_soft_atomic_clashes_ | GlycanClashCheckMover | private |
glycan_resnums_ | GlycanClashCheckMover | private |
GlycanClashCheckMover() | GlycanClashCheckMover | inline |
GlycanClashCheckMover(GlycanClashCheckMover const &)=default | GlycanClashCheckMover | |
ignore_full_res_output_ | GlycanClashCheckMover | private |
ignore_hydrogens_ | GlycanClashCheckMover | private |
init() | GlycanClashCheckMover | inlineprivate |
is_clashing(core::pose::Pose const &pose, core::Size const glycan_resnum, core::Size const other_resnum, core::Size const gx) | GlycanClashCheckMover | inlineprivate |
lj_n_ | GlycanClashCheckMover | private |
lj_radius_to_zero_e_radius(core::Real num) const | GlycanClashCheckMover | inlineprivate |
output_per_glycan_data_ | GlycanClashCheckMover | private |
pymol_print_ | GlycanClashCheckMover | private |
reinitialize_for_each_job() const override | GlycanClashCheckMover | inline |
report_data(core::pose::Pose &pose) | GlycanClashCheckMover | inlineprivate |
res_data_ | GlycanClashCheckMover | private |
score_data_ | GlycanClashCheckMover | private |
show(std::ostream &output=std::cout) const override | GlycanClashCheckMover | inline |
soft_clash_percent_ | GlycanClashCheckMover | private |
tabulate_individual_data(std::string const &clash_type, std::string const &data_type, core::pose::Pose const &pose, std::map< std::string, utility::vector1< core::Size > > const &data) | GlycanClashCheckMover | inlineprivate |
total_atom_clashes(utility::vector1< core::Size > const &clashes) | GlycanClashCheckMover | inlineprivate |
total_residue_clashes(utility::vector1< core::Size > const &clashes, core::Size at_least_x) | GlycanClashCheckMover | inlineprivate |
~GlycanClashCheckMover() override=default | GlycanClashCheckMover | |