Rosetta
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test_terpenes.py File Reference

Test terpene RTs. More...

Namespaces

 test_terpenes
 

Variables

 test_terpenes.chm = rosetta.core.chemical.ChemicalManager.get_instance()
 
 test_terpenes.rts = chm.residue_type_set('fa_standard').get_self_ptr()
 
 test_terpenes.score_fxn = get_score_function()
 
 test_terpenes.lower = conformation.ResidueFactory.create_residue(rts.name_map("isoprene:terpene_lower_full"))
 
 test_terpenes.inner = conformation.ResidueFactory.create_residue(rts.name_map("isoprene"))
 
 test_terpenes.upper = conformation.ResidueFactory.create_residue(rts.name_map("isoprene:terpene_upper_full"))
 
int test_terpenes.i = ii + 1
 
tuple test_terpenes.before_score = ( *score_fxn )( pose )
 
 test_terpenes.mcpose = Pose(pose)
 
 test_terpenes.naccept
 
 test_terpenes.nthermal
 
 test_terpenes.nreject
 
 test_terpenes.resi = int(numeric.random.rg().uniform() * pose.total_residue() + 1)
 
 test_terpenes.tori = int(numeric.random.rg().uniform() * (pose.residue(resi).mainchain_torsions().size() - 1) + 2)
 
 test_terpenes.torval
 
 test_terpenes.mcscore
 
 test_terpenes.pose = mcpose
 
 test_terpenes.min = MinMover(mm, score_fxn, "lbfgs_armijo_nonmonotone", 0.01, True)
 

Detailed Description

Test terpene RTs.

Author
Andrew Watkins