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Rosetta
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This is the complete list of members for CrystFFTDock, including all inherited members.
| apply(Pose &pose) override | CrystFFTDock | |
| c2i_ | CrystFFTDock | private |
| c_clashdist_ | CrystFFTDock | private |
| ca_clashdist_ | CrystFFTDock | private |
| cb_clashdist_ | CrystFFTDock | private |
| cluster_cutoff_ | CrystFFTDock | private |
| CrystFFTDock() | CrystFFTDock | inline |
| debug_ | CrystFFTDock | private |
| debug_exact_ | CrystFFTDock | private |
| do_convolution(FArray3D< Real > const &rho, FArray3D< Real > const &Srho, numeric::xyzMatrix< Real > S, FArray3D< Real > &conv_out) | CrystFFTDock | |
| dump_transformed_pdb(Pose pose, InterfaceHit ih, numeric::UniformRotationSampler const &urs, std::string outname) | CrystFFTDock | |
| eval_native_ | CrystFFTDock | private |
| fft2dslice(FArray3D< Real > const &rho, FArray3D< std::complex< Real > > &Frho, int axisSlice) | CrystFFTDock | |
| get_clash_score_exact(numeric::xyzVector< int > xyz_grid, numeric::xyzMatrix< Real > R, numeric::xyzVector< Real > T, FArray3D< Real > const &r_rho_ca) | CrystFFTDock | |
| get_interfaces_allatom(Pose pose, utility::vector1< core::kinematics::RT > const &rts, numeric::xyzMatrix< Real > R, numeric::xyzVector< Real > xyz_grid, utility::vector1< SingleInterface > &allInterfaces) | CrystFFTDock | |
| get_name() const override | CrystFFTDock | inline |
| get_radius_of_pose(Pose &pose) | CrystFFTDock | |
| get_transform_distance(InterfaceHit ih_vec, InterfaceHit ih_vec_clustered, numeric::UniformRotationSampler const &urs, Real radius) | CrystFFTDock | |
| grid_ | CrystFFTDock | private |
| i2c_ | CrystFFTDock | private |
| ifft2dslice(FArray3D< std::complex< Real > > const &Frho, FArray3D< Real > &rho, int axisSlice) | CrystFFTDock | |
| interfacedist_ | CrystFFTDock | private |
| maxclash_ | CrystFFTDock | private |
| mininterface_ | CrystFFTDock | private |
| mininterface_sum_ | CrystFFTDock | private |
| n_clashdist_ | CrystFFTDock | private |
| nmodels_ | CrystFFTDock | private |
| o_clashdist_ | CrystFFTDock | private |
| oversamplegrid_ | CrystFFTDock | private |
| project_along_axis(FArray3D< Real > &rho, numeric::xyzVector< Real > axis) | CrystFFTDock | |
| resample_maps_and_get_self(FArray3D< Real > const &rho_ca, FArray3D< Real > const &rho_cb, numeric::xyzMatrix< Real > R, protocols::cryst::Spacegroup const &sg, FArray3D< Real > &r_rho_ca, FArray3D< Real > &r_rho_cb, utility::vector1< SingleInterface > &p1_interface_map) | CrystFFTDock | |
| rot_step_ | CrystFFTDock | private |
| rotnum_ | CrystFFTDock | private |
| setup_maps(Pose &pose, FArray3D< Real > &rho_ca, FArray3D< Real > &rho_cb, Real trans_step) | CrystFFTDock | |
| sg_ | CrystFFTDock | private |
| ss_only_ | CrystFFTDock | private |
| trans_step_ | CrystFFTDock | private |
| transform_map(FArray3D< Real > const &rho, numeric::xyzMatrix< Real > S, numeric::xyzVector< Real > T, FArray3D< Real > &Srho) | CrystFFTDock | |
| transform_map_offset0(FArray3D< Real > const &rho, numeric::xyzMatrix< Real > S, FArray3D< Real > &Srho) | CrystFFTDock | |
| transform_pdb(Pose const &pose, InterfaceHit ih, numeric::UniformRotationSampler const &urs) | CrystFFTDock | |
| writeMRC(FArray3D< Real > density, std::string mapfilename, bool is_oversampled=false, bool fftshift=false) | CrystFFTDock |
1.9.1