docking.OptionKeys.gen.hh File Reference

basic::options::OptionKeys collection More...

#include <basic/options/keys/OptionKeys.hh>

Namespaces
	basic
	Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input.
	basic::options
	basic::options::OptionKeys
	basic::options::OptionKeys::docking
	basic::options::OptionKeys::docking::ligand
	basic::options::OptionKeys::docking::ligand::grid

Variables
BooleanOptionKey const	basic::options::OptionKeys::docking::kick_relax
BooleanOptionKey const	basic::options::OptionKeys::docking::docking
BooleanOptionKey const	basic::options::OptionKeys::docking::view
BooleanOptionKey const	basic::options::OptionKeys::docking::no_filters
StringVectorOptionKey const	basic::options::OptionKeys::docking::design_chains
FileOptionKey const	basic::options::OptionKeys::docking::recover_sidechains
StringOptionKey const	basic::options::OptionKeys::docking::partners
BooleanOptionKey const	basic::options::OptionKeys::docking::docking_local_refine
BooleanOptionKey const	basic::options::OptionKeys::docking::low_res_protocol_only
StringOptionKey const	basic::options::OptionKeys::docking::docking_low_res_score
BooleanOptionKey const	basic::options::OptionKeys::docking::randomize1
BooleanOptionKey const	basic::options::OptionKeys::docking::randomize2
BooleanOptionKey const	basic::options::OptionKeys::docking::use_ellipsoidal_randomization
BooleanOptionKey const	basic::options::OptionKeys::docking::spin
RealVectorOptionKey const	basic::options::OptionKeys::docking::tilt
StringOptionKey const	basic::options::OptionKeys::docking::tilt1_center
StringOptionKey const	basic::options::OptionKeys::docking::tilt2_center
RealVectorOptionKey const	basic::options::OptionKeys::docking::dock_pert
RealOptionKey const	basic::options::OptionKeys::docking::uniform_trans
BooleanOptionKey const	basic::options::OptionKeys::docking::center_at_interface
IntegerOptionKey const	basic::options::OptionKeys::docking::dock_mcm_first_cycles
IntegerOptionKey const	basic::options::OptionKeys::docking::dock_mcm_second_cycles
IntegerOptionKey const	basic::options::OptionKeys::docking::docking_centroid_outer_cycles
IntegerOptionKey const	basic::options::OptionKeys::docking::docking_centroid_inner_cycles
BooleanOptionKey const	basic::options::OptionKeys::docking::dock_min
StringOptionKey const	basic::options::OptionKeys::docking::flexible_bb_docking
RealOptionKey const	basic::options::OptionKeys::docking::flexible_bb_docking_interface_dist
StringOptionKey const	basic::options::OptionKeys::docking::ensemble1
StringOptionKey const	basic::options::OptionKeys::docking::ensemble2
RealOptionKey const	basic::options::OptionKeys::docking::dock_mcm_trans_magnitude
RealOptionKey const	basic::options::OptionKeys::docking::dock_mcm_rot_magnitude
RealOptionKey const	basic::options::OptionKeys::docking::minimization_threshold
RealOptionKey const	basic::options::OptionKeys::docking::temperature
IntegerOptionKey const	basic::options::OptionKeys::docking::repack_period
BooleanOptionKey const	basic::options::OptionKeys::docking::extra_rottrial
BooleanOptionKey const	basic::options::OptionKeys::docking::dock_rtmin
BooleanOptionKey const	basic::options::OptionKeys::docking::sc_min
BooleanOptionKey const	basic::options::OptionKeys::docking::norepack1
BooleanOptionKey const	basic::options::OptionKeys::docking::norepack2
IntegerVectorOptionKey const	basic::options::OptionKeys::docking::bb_min_res
IntegerVectorOptionKey const	basic::options::OptionKeys::docking::sc_min_res
BooleanOptionKey const	basic::options::OptionKeys::docking::dock_ppk
IntegerOptionKey const	basic::options::OptionKeys::docking::max_repeats
RealVectorOptionKey const	basic::options::OptionKeys::docking::dock_lowres_filter
RealOptionKey const	basic::options::OptionKeys::docking::SymDock_lowres_filter
IntegerVectorOptionKey const	basic::options::OptionKeys::docking::multibody
BooleanOptionKey const	basic::options::OptionKeys::docking::ignore_default_docking_task
StringOptionKey const	basic::options::OptionKeys::docking::low_patch
StringOptionKey const	basic::options::OptionKeys::docking::high_patch
StringOptionKey const	basic::options::OptionKeys::docking::high_min_patch
StringOptionKey const	basic::options::OptionKeys::docking::pack_patch
BooleanOptionKey const	basic::options::OptionKeys::docking::use_legacy_protocol
RealOptionKey const	basic::options::OptionKeys::docking::docklowres_trans_magnitude
RealOptionKey const	basic::options::OptionKeys::docking::docklowres_rot_magnitude
BooleanOptionKey const	basic::options::OptionKeys::docking::enable_pymol_viewer
BooleanOptionKey const	basic::options::OptionKeys::docking::SymDock_reduce_motif_dock_weights
RealOptionKey const	basic::options::OptionKeys::docking::SymDock_fa_rep_max
RealOptionKey const	basic::options::OptionKeys::docking::SymDock_fa_sol_max
BooleanOptionKey const	basic::options::OptionKeys::docking::ligand::ligand
StringOptionKey const	basic::options::OptionKeys::docking::ligand::protocol
BooleanOptionKey const	basic::options::OptionKeys::docking::ligand::soft_rep
BooleanOptionKey const	basic::options::OptionKeys::docking::ligand::tweak_sxfn
BooleanOptionKey const	basic::options::OptionKeys::docking::ligand::old_estat
BooleanOptionKey const	basic::options::OptionKeys::docking::ligand::random_conformer
IntegerOptionKey const	basic::options::OptionKeys::docking::ligand::improve_orientation
BooleanOptionKey const	basic::options::OptionKeys::docking::ligand::mutate_same_name3
RealOptionKey const	basic::options::OptionKeys::docking::ligand::subset_to_keep
RealOptionKey const	basic::options::OptionKeys::docking::ligand::min_rms
IntegerOptionKey const	basic::options::OptionKeys::docking::ligand::max_poses
BooleanOptionKey const	basic::options::OptionKeys::docking::ligand::minimize_ligand
RealOptionKey const	basic::options::OptionKeys::docking::ligand::harmonic_torsions
BooleanOptionKey const	basic::options::OptionKeys::docking::ligand::use_ambig_constraints
IntegerOptionKey const	basic::options::OptionKeys::docking::ligand::shear_moves
BooleanOptionKey const	basic::options::OptionKeys::docking::ligand::minimize_backbone
RealOptionKey const	basic::options::OptionKeys::docking::ligand::harmonic_Calphas
RealOptionKey const	basic::options::OptionKeys::docking::ligand::tether_ligand
RealVectorOptionKey const	basic::options::OptionKeys::docking::ligand::start_from
StringOptionKey const	basic::options::OptionKeys::docking::ligand::option_file
RealOptionKey const	basic::options::OptionKeys::docking::ligand::ligand_ensemble
IntegerOptionKey const	basic::options::OptionKeys::docking::ligand::iphold_cen_cycles
IntegerOptionKey const	basic::options::OptionKeys::docking::ligand::iphold_fa_cycles
BooleanOptionKey const	basic::options::OptionKeys::docking::ligand::grid::grid
FileOptionKey const	basic::options::OptionKeys::docking::ligand::grid::grid_kin
FileOptionKey const	basic::options::OptionKeys::docking::ligand::grid::grid_map

Detailed Description

basic::options::OptionKeys collection

Author

Stuart G. Mentzer (Stuar.nosp@m.t_Me.nosp@m.ntzer.nosp@m.@obj.nosp@m.exx.c.nosp@m.om)

James M. Thompson (tex@u.nosp@m..was.nosp@m.hingt.nosp@m.on.e.nosp@m.du)