|
| bool | core::io::mmtf::dump_mmtf (core::pose::Pose const &pose, std::string const &file_name, StructFileRepOptionsCOP options=StructFileRepOptionsCOP(new StructFileRepOptions)) |
| | Dump a MMTF from a pose to a file. Return success or failure. More...
|
| |
| core::io::StructFileRepOP | core::io::mmtf::dump_mmtf (core::pose::Pose const &pose, std::ostream &out, StructFileRepOptionsCOP options) |
| | Dump an MMTF from a pose to an ostream. More...
|
| |
| core::io::StructFileRepOP | core::io::mmtf::dump_mmtf (core::pose::Pose const &pose, std::string const &jd2_job_data, std::ostream &out) |
| | Dump an MMTF from a pose, optionally extracting extra info. More...
|
| |
| bool | core::io::mmtf::dump_mmtf (std::string const &file_name, StructFileRepOP sfr, StructFileRepOptions const &options) |
| | dump_mmtf function. Create the sfr from pose using the PoseToStructFileRepConverter class. Return success or failure. More...
|
| |
| template<typename T > |
| void | core::io::mmtf::add_if_not_empty (std::string const &given_name, T const &content, std::map< std::string, msgpack::object > &target_map, msgpack::zone &zone) |
| | add_if_not_empty – adds to a sd {string: msgpack::object} templated to allow us to add a variety of containers More...
|
| |
| template<typename T > |
| void | core::io::mmtf::resize_and_add_if_not_empty (T const &data, std::vector< T > &destination, core::Size const &data_index, core::Size const &max_size) |
| | resize_add_if_not_empty – adds T to std::vector< T > if T isn't empty templated to allow us to add a variety of containers More...
|
| |
| void | core::io::mmtf::set_mmtf_default_options (core::io::StructFileRepOptions &options) |
| | Set StructFileRepOptions defauls for mmtf. More...
|
| |
| aiChain | core::io::mmtf::make_chain (utility::vector0< AtomInformation > const &chain_atoms) |
| | group chain_atoms into groups based on chain_id and resseq More...
|
| |
| aiPose | core::io::mmtf::aiPose_from_sfr (core::io::StructFileRep const &sfr) |
| | Convert linear sfr to vec0[vec0[vec0[AtomInformation]]]. More...
|
| |
| aiModels | core::io::mmtf::aiModels_from_sfrs (utility::vector1< core::io::StructFileRepOP > const &sfrs) |
| | Convert linear sfr to vec0[vec0[vec0[vec0[AtomInformation]]]]. More...
|
| |
| void | core::io::mmtf::add_extra_data (::mmtf::StructureData &sd, utility::vector1< core::io::StructFileRepOP > const &sfrs, core::io::StructFileRepOptions const &options) |
| | Add extra info to the structureData if we are asked to add it includes: heterogen info. More...
|
| |
| ::mmtf::StructureData | core::io::mmtf::sfrs_to_sd (utility::vector1< core::io::StructFileRepOP > sfrs, core::io::StructFileRepOptions const &options) |
| |
| ::mmtf::StructureData | core::io::mmtf::sfr_to_sd (core::io::StructFileRepOP sfr, core::io::StructFileRepOptions const &options) |
| |
| void | core::io::mmtf::dump_mmtf (std::ostream &out, utility::vector1< core::io::StructFileRepOP > sfrs, core::io::StructFileRepOptions const &options) |
| | dump single mmtf function. More...
|
| |
| void | core::io::mmtf::dump_mmtf (std::ostream &out, StructFileRepOP sfr, StructFileRepOptions const &options) |
| | dump single mmtf function. More...
|
| |
