SequenceAlignment.cc File Reference

#include <core/types.hh>
#include <core/sequence/ScoringScheme.hh>
#include <core/sequence/Sequence.hh>
#include <core/id/SequenceMapping.hh>
#include <core/sequence/SequenceAlignment.hh>
#include <utility/exit.hh>
#include <utility/io/izstream.hh>
#include <ObjexxFCL/string.functions.hh>
#include <iostream>
#include <string>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::sequence

Functions
static basic::Tracer	core::sequence::tr ("core.sequence.SequenceAlignment")
std::ostream &	core::sequence::operator<< (std::ostream &out, const SequenceAlignment &sa)
std::istream &	core::sequence::operator>> (std::istream &in, SequenceAlignment &aln)
bool	core::sequence::operator< (SequenceAlignment const &lhs, SequenceAlignment const &rhs)