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Rosetta
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selcetion of pose residues More...
#include <core/pose/Pose.fwd.hh>#include <core/pose/ResidueIndexDescription.fwd.hh>#include <core/types.hh>#include <core/select/residue_selector/ResidueSelector.fwd.hh>#include <utility/tag/Tag.fwd.hh>#include <utility/tag/XMLSchemaGeneration.fwd.hh>#include <string>#include <set>Namespaces | |
| core | |
| A class for reading in the atom type properties. | |
| core::pose | |
Functions | |
| ResidueIndexDescriptionCOP | core::pose::parse_resnum (std::string const &resnum, bool const check_for_refpose=false) |
| Creates a ResidueIndexDescription from a string @detail Recognizes three forms of numbering: More... | |
| core::Size | core::pose::parse_resnum (std::string const &resnum, core::pose::Pose const &pose, bool const check_for_refpose=false) |
| Extracts a residue number from a string. @detail Recognizes three forms of numbering: More... | |
| set< Size > | core::pose::get_resnum_list (std::string const &str, core::pose::Pose const &pose) |
| returns a resnum list directly from a string More... | |
| utility::vector1< Size > | core::pose::get_resnum_list_ordered (std::string const &str, core::pose::Pose const &pose) |
| returns a resnum list directly from a string, preserving order More... | |
| bool | core::pose::is_referencepose_number (std::string const &str, std::string &refpose_string, core::Size &refpose_resnumber, signed long &refpose_offset) |
| Is a string of the format "refpose(<refposename>,<refposenumber>)" or "refpose(<refposename>,<refposenumber>)+/-<number>"? More... | |
| core::Size | core::pose::get_resnumber_from_reference_pose (std::string const &refpose_name, core::Size const refpose_number, signed long const refpose_offset, core::pose::Pose const &pose) |
| Given the name of a ReferencePose object in the pose, a residue number in that reference pose, and a residue offset, this function returns the Rosetta number of the corresponding residue in the pose. Should throw an error if the ReferencePose doesn't exist in the pose, or 0 if no corresponding residue exists in the pose. More... | |
| std::string | core::pose::get_resnum_string (utility::tag::TagCOP tag_ptr, std::string const &prefix="") |
| DEPRECATED - provided for legacy usage only. Don't use for new code. Instead, just use a single option which uses the parse_resnum syntax to specify. More... | |
| std::string | core::pose::get_resnum_string (utility::tag::TagCOP tag_ptr, std::string const &prefix, std::string const &default_value) |
| DEPRECATED - provided for legacy usage only. Don't use for new code. Instead, just use a single option which uses parse_resnum syntax to specify. More... | |
| core::select::residue_selector::ResidueSelectorOP | core::pose::get_resnum_selector (utility::tag::TagCOP tag_ptr, std::string const &tag) |
| void | core::pose::attributes_for_get_resnum_string (utility::tag::AttributeList &attlist, std::string const &prefix) |
| Companion function for get_resnum. More... | |
| void | core::pose::attributes_for_get_resnum_selector (utility::tag::AttributeList &attlist, utility::tag::XMLSchemaDefinition &xsd, string const &tag, string const &description) |
| Companion function for get_resnum_list. More... | |
| void | core::pose::attributes_for_parse_resnum (utility::tag::AttributeList &attlist, std::string const &att_name, std::string const &description="") |
| Companion function for parse_resnum. More... | |
selcetion of pose residues
1.9.1