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Implementation of the Peptiderive protocol. Since all the options are equivalent (both in name and in meaning) to the command-line options of the app, it's best to see the PeptiDerive application documentation.
<PeptideDeriver name="(&string)"
pep_lengths="( 10 &int,...)"
skip_zero_isc="( true &bool)"
dump_peptide_pose="( false &bool)"
dump_cyclic_poses="( false &bool)"
dump_report_file="( false &bool)"
dump_prepared_pose="( false &bool)"
do_minimize="( true &bool)"
scorefxn_deriver="(&string)"
optimize_cyclic_threshold="( 0.35 &real)"
restrict_receptors_to_chains="( "" &string,...)"
restrict_partners_to_chains="( "" &string,...)"
/>