Getting Started

Build Documentation

Rosetta Tutorials

Rosetta Basics

Rosetta Applications

Rosetta Scripting Interfaces

• RosettaScripts

  • Movers

  • Residue Selectors

  • PackerPalettes

  • Task Operations

  • Simple Metrics

  • Filters

  • FeaturesReporters

  • Multistage

  • Composite Protocols

  • Symmetry and RosettaScripts

  • Databases with RosettaScripts

  • Formatting conventions

  • For Developers

• TopologyBroker

• PyRosetta

Development Documentation

Internal Documentation

How to Write Documentation

FAQ

Glossary

RosettaEncyclopedia

Options list

MetaData

Author: Sebastian Raemisch (raemisch@scripps.edu) and Jared Adolf-Bryfogle (jadolfbr@gmail.com)

Reference

Growing Glycans in Rosetta: Accurate de novo glycan modeling, density fitting, and rational sequon design Jared Adolf-Bryfogle, J. W Labonte, J. C Kraft, M. Shapavolov, S. Raemisch, T. Lutteke, F. Dimaio, C. D Bahl, J. Pallesen, N. P King, J. J Gray, D. W Kulp, W. R Schief bioRxiv 2021.09.27.462000; https://doi.org/10.1101/2021.09.27.462000

Autogenerated Tag Syntax Documentation:

---

Select a residue in a all occurances of a user-specified sequence motif.

<ResidueInSequenceMotifSelector name="(&string;)" motif="(&string_cslist;)" />

• motif: Comma-separated string: Regular a exression that describes the sequence motif, position within the motif (e.g motif="N.[ST],1)"

---

See Also

• CreateSequenceMotifMover : Create a sequence motif in a protein
• SequenceMotifTaskOperation : Task op to create a sequence motif
• ResidueSelectors: List of Residue Selectors
• SimpleMetrics: List of SimpleMetrics and their compatability with Residue Selectors

• PerResidueMetrics: PerResidueRealMetrics that are all compatible with selectors

• Analyzing Results: Tips for analyzing results generated using Rosetta

• Solving a Biological Problem: Guide to approaching biological problems using Rosetta
• Commands collection: A list of example command lines for running Rosetta executable files