JointSequence

<JointSequence use_current="(true &bool)"  use_native="(false &bool)" filename="(&string)" native="(&string)" use_natro="(false &bool)" 
use_fasta="(false &bool)" chain="( &integer)" use_chain="(&integer)" />

Prohibit designing to residue identities that aren't found at that position in any of the listed structures:

use_current - Use residue identities from the current structure (input pose to apply() of the taskoperation)
use_native - Use residue identities from the structure listed with -in:file:native
filename - Use residue identities from the listed file
native - Use residue identities from the listed file
use_fasta - Use residue identities from a native sequence given by a FASTA file (specify the path to the FASTA file with the -in:file:fasta flag at the command line)
chain - to which chain to apply, 0 is all chains
use_chain - given an additional input pdb, such as through in:file:native, which chain should the sequence be derived from. 0 is all chains.

If use_natro is true, the task operation also adds the rotamers from the native structures (use_native/native) in the rotamer library.

JointSequence

JointSequence

See Also