Old Sewing Documentation

Getting Started

Build Documentation

Rosetta Basics

Application Documentation

Scripting Interfaces

• RosettaScripts

  • Movers

  • Residue Selectors

  • PackerPalettes

  • Task Operations

  • Simple Metrics

  • Filters

  • Features Reporters

  • Composite Protocols

    • GeneralizedKIC

    • Metropolis Hastings

    • SEWING

    • Funtional Folding and Design

  • Databases with RosettaScripts

  • Formatting conventions

  • For Developers

• TopologyBroker

• PyRosetta

Development Documentation

Internal Documentation

How to Write Documentation

FAQ

Glossary

Options list

As the title implies, these steps are outdated, but preserved for reference

The Four Steps of Old SEWING

1. Model Generation - Extraction of 'models' from native structures
2. Model Comparison - Structurally compare models to one another using a geometric hashing algorithm
3. Assembly - Stitch models together based on structural superimposition to form novel backbones
4. Refinement - Refine backbones, design side chains, and select structures generated using SEWING