Autogenerated Tag Syntax Documentation:


Add virtual residues (alanines) to either termini of a given chain. Used by SewAnythingAddMover to guide design to either end.

<AddFlankingVirtualResiduesMover name="(&string;)"
        N_term_residues="(0 &non_negative_integer;)"
        C_term_residues="(0 &non_negative_integer;)"
        chain_to_modify="(1 &non_negative_integer;)"
        remove_pre_pose="(0 &non_negative_integer;)" vital_selector="(&string;)" />
  • N_term_residues: How many residues should we add to the N terminus?
  • C_term_residues: How many residues should we add to the C terminus?
  • chain_to_modify: Number of the chain to be prepared
  • remove_pre_pose: Remove any current pre_pose res labels
  • vital_selector: vital residue selector. These can't move or mutate. The name of a previously declared residue selector or a logical expression of AND, NOT (!), OR, parentheses, and the names of previously declared residue selectors. Any capitalization of AND, NOT, and OR is accepted. An exclamation mark can be used instead of NOT. Boolean operators have their traditional priorities: NOT then AND then OR. For example, if selectors s1, s2, and s3 have been declared, you could write: 's1 or s2 and not s3' which would select a particular residue if that residue were selected by s1 or if it were selected by s2 but not by s3.