Autogenerated Tag Syntax Documentation:


Generate coordinate constraints from the input or a template pdb

<CAcstGenerator name="(&string;)" stddev="(3.0 &real;)"
        template_pdb="(&string;)" add_cst_seed="(0 &bool;)" replace="(1 &bool;)"
        seq_separation="(6 &non_negative_integer;)" distance="(6.0 &real;)"
        add_seed_residues="(&string;)" from_chain="(1 &non_negative_integer;)"
        to_chain="(1 &non_negative_integer;)" >
    <Seeds begin="(&string;)" end="(&string;)" />
    <Clear_cst_segments begin="(&string;)" end="(&string;)" />
</CAcstGenerator>
  • stddev: Contraint strength as stddev.
  • template_pdb: Template pdb to derive coordinate contraints from.
  • add_cst_seed: XRW TO DO
  • replace: XRW TO DO
  • seq_separation: XRW TO DO
  • distance: XRW TO DO
  • add_seed_residues: Residues to which to apply contraints.
  • from_chain: Chain from which to derive the constraints from.
  • to_chain: Chain which to apply the contraints to.

Subtag Seeds:

  • begin: (REQUIRED) First residue of a segment.
  • end: (REQUIRED) Last residue of a segment.

Subtag Clear_cst_segments:

  • begin: (REQUIRED) First residue of a segment.
  • end: (REQUIRED) Last residue of a segment.