scripting_documentation/RosettaScripts/xsd/mover_CloseFold

Autogenerated Tag Syntax Documentation:

XRW TO DO

<CloseFold name="(&string;)" fa_scorefxn="(&string;)" cen_scorefxn="(&string;)"
        fragments="(&string;)" add_chainbreakterm="(1 &bool;)"
        cutpoint_based="(1 &bool;)" use_kic="(0 &bool;)" idealize="(1 &bool;)"
        use_ccd="(1 &bool;)" trials_ccd="(3 &non_negative_integer;)"
        secstrct="(&string;)" template_pdb="(&string;)" chain_num="(&string;)" >
    <Seeds begin="(&string;)" end="(&string;)" />
</CloseFold>

fa_scorefxn: Name of score function to use
cen_scorefxn: Name of score function to use
fragments: (REQUIRED) Name of fragment file for fragment-based loop modeling.
add_chainbreakterm: Penalize chain break in score calculation.
cutpoint_based: Use cutpoint during loop moelding.
use_kic: Use KIC for loop modeling.
idealize: Sample only ideal bb torsions. Faster. idealize="false" is being ignored!
use_ccd: Use CCD for loop modeling.
trials_ccd: XRW TO DO
secstrct: File with secondary struct assignment for each residue in chain(s)
template_pdb: Template pdb file
chain_num: Comma-separated list of chain IDs. NOTE: chains have to be consecutive

Subtag Seeds:

begin: (REQUIRED) Beginning of seed fragments (residue number)
end: (REQUIRED) End of seed fragment (residue number)

scripting_documentation/RosettaScripts/xsd/mover_CloseFold_type