scripting_documentation/RosettaScripts/xsd/mover_DefineMovableLoops_type

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Autogenerated Tag Syntax Documentation:

---

Specific to seeded abinitio protocol. Finds loops after seeded abinitio that should be closed.

<DefineMovableLoops name="(&string;)" add_chainbreakterm="(1 &bool;)"
        cutpoint_based="(1 &bool;)" secstrct="(&string;)"
        template_pdb="(&string;)" chain_num="(&string;)" >
    <Seeds begin="(&string;)" end="(&string;)" />
</DefineMovableLoops>

• add_chainbreakterm: Penalize chain breaks.
• cutpoint_based: Use cutpoint in loop modeling.
• secstrct: File containg sec struct assignments for all residues in "chain_num"
• template_pdb: Template pdb file
• chain_num: Comma-separated list of chain IDs. NOTE: chains have to be consecutive

Subtag Seeds:

• begin: (REQUIRED) First residue of seed fragment.
• end: (REQUIRED) Last residue of seed fragment.

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