Autogenerated Tag Syntax Documentation:


Mover used for protein-protein docking.

<DockingProtocol name="(&string;)" docking_score_low="(&string;)"
        docking_score_high="(&string;)" partners="(&string;)"
        low_res_protocol_only="(false &bool;)"
        docking_local_refine="(false &bool;)" dock_min="(false &bool;)"
        ignore_default_docking_task="(false &bool;)"
        task_operations="(&task_operation_comma_separated_list;)"
        packer_palette="(&named_packer_palette;)" />
  • docking_score_low: Low-resolution docking score function
  • docking_score_high: High-resolution docking score function
  • partners: String specifying docking patners; underscore should separate the partners e.g. AB_C
  • low_res_protocol_only: Only perform low-resolution docking
  • docking_local_refine: Only perform high-resolution docking
  • dock_min: Use the DockMinMover
  • ignore_default_docking_task: Ignore the default docking task and define your own. Unless this is specified, task operations will be appended to the default docking task.
  • task_operations: A comma-separated list of TaskOperations to use.
  • packer_palette: A previously-defined PackerPalette to use, which specifies the set of residue types with which to design (to be pruned with TaskOperations).