Autogenerated Tag Syntax Documentation:
XRW TO DO
<RestrictConservedLowDdg name="(&string;)" use_occurrence_data="(true &bool;)"
restrict_to_repacking="(true &bool;)"
convert_scores_to_probabilities="(true &bool;)" filename="(&string;)"
min_aa_probability="(ℜ)" keep_native="(&bool;)"
chain_num="(1 &non_negative_integer;)"
probability_larger_than_current="(&bool;)"
ignore_pose_profile_length_mismatch="(&bool;)" debug="(false &bool;)"
conservation_cutoff_aligned_segments="(ℜ)"
conservation_cutoff_protein_interface_design="(ℜ)"
ddG_filename="(&string;)" conservation_cutoff="(ℜ)"
ddG_cutoff="(ℜ)" verbose="(&bool;)" >
<ProteinInterfaceDesign name="(&string;)"
repack_chain1="(1 &non_negative_integer;)"
repack_chain2="(1 &non_negative_integer;)"
design_chain1="(0 &non_negative_integer;)"
design_chain2="(1 &non_negative_integer;)"
allow_all_aas="(0 &non_negative_integer;)"
design_all_aas="(0 &non_negative_integer;)"
jump="(1 &non_negative_integer;)"
interface_distance_cutoff="(8.0 ℜ)"
modify_before_jump="(true &bool;)" modify_after_jump="(true &bool;)" />
<RestrictToAlignedSegments name="(&string;)" source_pdb="(&string;)"
start_res="(&string;)" stop_res="(&string;)"
chain="(1 &non_negative_integer;)" repack_shell="(6.0 ℜ)" >
<AlignedSegment name="(&string;)" source_pdb="(&string;)" start_res="(&string;)"
stop_res="(&string;)" />
</RestrictToAlignedSegments>
</RestrictConservedLowDdg>
Subtag ProteinInterfaceDesign: Restricts to the task that is the basis for protein-interface design.
Subtag RestrictToAlignedSegments: XRW TO DO
Subtag AlignedSegment: XRW TO DO