- a -

• ABS : ShapeComplementarityCalculator_Private.hh

- c -

• CUTOFF : CartesianBondedEnergy.cc

- d -

• DEFAULT_DIST_CUTOFF_MULTIPLIER : metalloproteins_util.hh
• DIST_TH : GaussianOverlapEnergy.cc , SuckerEnergy.cc

- f -

• foreach : reference_frames.cc , metalloproteins_util.cc

- i -

• INCLUDE_core_scoring_MembranePotential_cc : MembranePotential.cc
• INCLUDED_core_pack_packer_trie_trie_vs_trie_HH : trie_vs_path.cc
• INCLUDED_core_pose_stream_util_HH : util.cc
• INCLUDED_core_scoring_membrane_FaMPEnvEnergy_cc : FaMPEnvEnergy.cc
• INCLUDED_core_scoring_membrane_FaMPSolvEnergy_cc : FaMPSolvEnergy.cc
• INCLUDED_core_scoring_membrane_MembraneData_cc : MembraneData.cc
• INCLUDED_core_scoring_membrane_MPCbetaEnergy_cc : MPCBetaEnergy.cc
• INCLUDED_core_scoring_membrane_MPEnvEnergy_cc : MPEnvEnergy.cc
• INCLUDED_core_scoring_membrane_MPLipoEnergy_cc : MPLipoEnergy.cc
• INCLUDED_core_scoring_membrane_MPNonHelixPenalty_cc : MPNonHelixPenalty.cc
• INCLUDED_core_scoring_membrane_MPPairEnergy_cc : MPPairEnergy.cc
• INCLUDED_core_scoring_membrane_MPTerminiPenalty_cc : MPTerminiPenalty.cc
• INCLUDED_core_scoring_membrane_MPTMProjPenalty_cc : MPTMProjPenalty.cc
• INCLUDED_core_scoring_sc_MolecularSurfaceCalculator_cc : MolecularSurfaceCalculator.cc
• INCLUDED_core_scoring_sc_ShapeComplementarityCalculator_cc : ShapeComplementarityCalculator.cc

- m -

• Math_PI : FACTSResidue.cc
• MAX : ShapeComplementarityCalculator_Private.hh
• MAX_SUBDIV : ShapeComplementarityCalculator_Private.hh
• MAX_UINT16 : motif_hash_stuff.cc , util.cc , xfrags.cc
• MAX_UINT8 : motif_hash_stuff.cc , util.cc , xfrags.cc
• MIN : ShapeComplementarityCalculator_Private.hh

- p -

• PI : ShapeComplementarityCalculator_Private.hh

- r -

• ROTATE : ResidualDipolarCoupling.cc

- s -

• SQRT_2PI : USOGFunc.cc

- t -

• THROW_EXCEPTION : serialize_pose.cc

- u -

• UPPER_MULTIPLE : ShapeComplementarityCalculator.cc

- x -

• XFORM_SCORE_FILE_VERSION : util.cc , xfrags.cc
• XX : ResidualDipolarCoupling.cc

- y -

• YY : ResidualDipolarCoupling.cc

- z -

• ZZ : ResidualDipolarCoupling.cc