AbrelaxApplication.hh File Reference

Application-level code for Abrelax, fold_cst and JumpingFoldCst protocols. More...

#include <protocols/jobdist/JobDistributors.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/types.hh>
#include <protocols/jobdist/Jobs.fwd.hh>
#include <core/io/silent/SilentFileData.fwd.hh>
#include <core/scoring/constraints/ConstraintSet.fwd.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/fragment/FragSet.fwd.hh>
#include <protocols/evaluation/PoseEvaluator.fwd.hh>
#include <protocols/evaluation/PCA.fwd.hh>
#include <protocols/abinitio/Protocol.fwd.hh>
#include <protocols/abinitio/Templates.fwd.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/checkpoint/CheckPointer.hh>
#include <protocols/jumping/JumpSetup.fwd.hh>
#include <protocols/jumping/MembraneJump.fwd.hh>
#include <core/fragment/SecondaryStructure.fwd.hh>
#include <string>
#include <vector>
#include <utility/vector1.hh>

Classes
class	protocols::abinitio::AbrelaxApplication
	application level code for Abrelax, Foldconstraints and JumpingFoldconstraints WARNING WARNING WARNING. THREAD UNSAFE. INVOKES ConstraintFactory::replace_creator. CODE THAT ABUSES SINGLETONS LIKE THIS OUGHT TO BE SHOT. More...

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::abinitio

Detailed Description

Application-level code for Abrelax, fold_cst and JumpingFoldCst protocols.

Detailed:

use -help to see options usage of class: call AbrelaxApplication::register_options() before core::init::init in main program make instance and call run() method.

Author

Oliver Lange