util.hh File Reference

initialization protocols for relax and utility functions More...

#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/pose/Pose.fwd.hh>
#include <protocols/relax/RelaxProtocolBase.fwd.hh>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::relax

Functions
void	protocols::relax::setup_membrane_topology (core::pose::Pose &pose, std::string spanfile)
	(pba) read in membrane topology More...
void	protocols::relax::make_dna_rigid (core::pose::Pose &pose, core::kinematics::MoveMap &mm)
	Make DNA Rigid in movemap if found in pose. More...
void	protocols::relax::setup_for_dna (core::scoring::ScoreFunction &scorefxn)
	Set energy method options for DNA-DNA. Any other optimization for DNA relax should go here. More...
void	protocols::relax::relax_pose (pose::Pose &pose, core::scoring::ScoreFunctionOP scorefxn, std::string const &tag)
RelaxProtocolBaseOP	protocols::relax::generate_relax_from_cmd (bool NULL_if_no_flag)

Detailed Description

initialization protocols for relax and utility functions

Author

Mike Tyka