ExtraThreadingMover.cc File Reference

method declarations for ExtraThreadingMover. More...

#include <protocols/comparative_modeling/ExtraThreadingMover.hh>
#include <core/types.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/pose/util.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/conformation/Residue.fwd.hh>
#include <core/id/AtomID.hh>
#include <core/id/AtomID_Map.hh>
#include <core/id/AtomID_Mask.fwd.hh>
#include <core/sequence/SWAligner.hh>
#include <core/sequence/Sequence.hh>
#include <core/sequence/ScoringScheme.fwd.hh>
#include <core/sequence/SimpleScoringScheme.hh>
#include <core/id/SequenceMapping.hh>
#include <core/sequence/SequenceAlignment.hh>
#include <core/sequence/util.hh>
#include <core/scoring/rms_util.hh>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>
#include <utility/string_util.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <core/pose/util.tmpl.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::comparative_modeling

Functions
static thread_local basic::Tracer	protocols::comparative_modeling::tr ("protocols.comparative_modeling.extra_threading")

Detailed Description

method declarations for ExtraThreadingMover.

Author

James Thompson