DDomainParse.cc File Reference

A reimplementation of DDomain domain parsing algorithm, Protein Sci.16,947–955 (2007) More...

#include <protocols/hybridization/DDomainParse.hh>
#include <core/pose/Pose.hh>
#include <core/chemical/ResidueType.hh>
#include <core/conformation/Residue.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/Jump.hh>
#include <core/kinematics/Edge.hh>
#include <core/types.hh>
#include <core/scoring/constraints/Constraint.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/constraints/ConstraintIO.hh>
#include <core/scoring/constraints/AtomPairConstraint.hh>
#include <core/scoring/func/ScalarWeightedFunc.hh>
#include <core/scoring/func/SOGFunc.hh>
#include <core/scoring/constraints/util.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/symmetry/util.hh>
#include <core/optimization/symmetry/SymAtomTreeMinimizer.hh>
#include <protocols/simple_moves/symmetry/SymPackRotamersMover.hh>
#include <core/conformation/symmetry/SymmetricConformation.hh>
#include <core/conformation/symmetry/SymmetryInfo.hh>
#include <core/pack/task/PackerTask.hh>
#include <list>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::hybridization

Detailed Description

A reimplementation of DDomain domain parsing algorithm, Protein Sci.16,947–955 (2007)

Author

Frank DiMaio