JumpSample.hh File Reference

read jump-definition file setups fold tree an chainbreak variants loop code didn't work because fold-tree to complicated ( overlapping loops ) More...

#include <protocols/jumping/JumpSetup.fwd.hh>
#include <protocols/jumping/PairingLibrary.hh>
#include <core/scoring/dssp/PairingsList.hh>
#include <core/types.hh>
#include <core/kinematics/ShortestPathInFoldTree.fwd.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/fragment/FrameList.fwd.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <cstdlib>
#include <string>
#include <core/fragment/FrameIterator.fwd.hh>
#include <core/fragment/SecondaryStructure.fwd.hh>
#include <utility/vector1.hh>

Classes
class	protocols::jumping::JumpSample

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::jumping

Typedefs
typedef utility::vector1 < jumping::Interval >	protocols::jumping::JumpList

Detailed Description

read jump-definition file setups fold tree an chainbreak variants loop code didn't work because fold-tree to complicated ( overlapping loops )

Detailed:

Author

Oliver Lange