MedalMover.cc File Reference

#include <protocols/medal/MedalMover.hh>
#include <iomanip>
#include <iostream>
#include <map>
#include <string>
#include <boost/bind.hpp>
#include <boost/format.hpp>
#include <boost/function.hpp>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/jumps.OptionKeys.gen.hh>
#include <basic/options/keys/nonlocal.OptionKeys.gen.hh>
#include <basic/options/keys/rigid.OptionKeys.gen.hh>
#include <numeric/interpolate.hh>
#include <numeric/prob_util.hh>
#include <utility/vector1.hh>
#include <core/chemical/ChemicalManager.fwd.hh>
#include <core/fragment/FragmentIO.hh>
#include <core/fragment/FragSet.hh>
#include <core/import_pose/import_pose.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/io/silent/SilentStruct.hh>
#include <core/io/silent/SilentStructFactory.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/constraints/util.hh>
#include <core/scoring/methods/EnergyMethodOptions.hh>
#include <core/sequence/SequenceAlignment.hh>
#include <core/util/ChainbreakUtil.hh>
#include <core/util/kinematics_util.hh>
#include <core/util/SwitchResidueTypeSet.hh>
#include <protocols/comparative_modeling/ThreadingJob.hh>
#include <protocols/comparative_modeling/LoopRelaxMover.hh>
#include <protocols/comparative_modeling/LoopRelaxThreadingMover.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/simple_moves/BackboneMover.hh>
#include <protocols/moves/CyclicMover.hh>
#include <protocols/simple_moves/rational_mc/RationalMonteCarlo.hh>
#include <protocols/rigid/RigidBodyMotionMover.hh>
#include <protocols/nonlocal/BiasedFragmentMover.hh>
#include <protocols/nonlocal/Policy.hh>
#include <protocols/nonlocal/PolicyFactory.hh>
#include <protocols/nonlocal/StarTreeBuilder.hh>
#include <protocols/nonlocal/util.hh>
#include <protocols/medal/util.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::medal

Typedefs
typedef boost::function< void(const core::pose::Pose &)>	protocols::medal::Trigger

Functions
static thread_local basic::Tracer	protocols::medal::TR ("protocols.medal.MedalMover")
void	protocols::medal::on_pose_accept (const core::pose::Pose &pose)

Detailed Description

Author

Christopher Miles (cmile.nosp@m.s@uw.nosp@m..edu)