RBSegment.cc File Reference

#include <protocols/rbsegment_relax/RBSegment.hh>
#include <basic/Tracer.hh>
#include <numeric/random/random.hh>
#include <string>
#include <fstream>
#include <core/id/SequenceMapping.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/Loops.hh>
#include <utility/vector1.hh>
#include <map>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::rbsegment_relax

Functions
static thread_local basic::Tracer	protocols::rbsegment_relax::TR_seg ("RBSegment")
core::Real	protocols::rbsegment_relax::square (core::Real X)
	helper function More...
void	protocols::rbsegment_relax::Tokenize (const std::string &str, utility::vector1< std::string > &tokens, const std::string &delimiters=" ")
	Helper function tokenizes a str. More...
void	protocols::rbsegment_relax::read_RBSegment_file (utility::vector1< RBSegment > &rbsegs, protocols::loops::Loops &loops, std::string filename, bool autoGenerateLoops, int nres, utility::vector1< core::Size > cutpoints)
	Parses an RB segment file into a vector of RBsegments. More...
void	protocols::rbsegment_relax::select_RBsegments (utility::vector1< RBSegment > const &rbsegs_in, protocols::loops::Loops const &loops_in, utility::vector1< RBSegment > &rbsegs_selected, protocols::loops::Loops &loops_selected)
	Select a single RB segment to perturb + attached loops. More...

Detailed Description

Author

Frank DiMaio

Srivatsan Raman