DockingInitialPerturbation.hh File Reference

initialization protocols for docking More...

#include <protocols/docking/types.hh>
#include <protocols/docking/DockingInitialPerturbation.fwd.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/filters/Filter.fwd.hh>
#include <protocols/docking/RigidBodyInfo.fwd.hh>
#include <basic/datacache/DataMap.hh>
#include <utility/tag/Tag.fwd.hh>
#include <utility/pointer/owning_ptr.hh>
#include <utility/vector1.hh>
#include <string>
#include <numeric/xyzVector.hh>

Classes
class	protocols::docking::DockingInitialPerturbation
	this mover carries out the initial perturbation phase of the RosettaDock algorithm based on user-inputted command line options More...
class	protocols::docking::DockingSlideIntoContact
	Contrary to the name, slides things apart first, then together. OK for proteins, bad for ligands (because they may escape the pocket permanently). More...
class	protocols::docking::FaDockingSlideIntoContact
	Slides docking partners together by monitoring fa_rep. More...

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::docking

Functions
std::ostream &	protocols::docking::operator<< (std::ostream &os, DockingSlideIntoContact const &mover)
std::ostream &	protocols::docking::operator<< (std::ostream &os, FaDockingSlideIntoContact const &fadock)

Detailed Description

initialization protocols for docking

This contains the functions that create initial positions for docking You can either randomize partner 1 or partner 2, spin partner 2, or perform a simple perturbation.

Author

Monica Berrondo