metrics.cc File Reference

Metrics for membrane framework proteins. More...

#include <protocols/membrane/metrics.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/membrane/MembraneInfo.hh>
#include <core/conformation/membrane/SpanningTopology.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/rms_util.tmpl.hh>
#include <core/pose/Pose.hh>
#include <core/types.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::membrane

Functions
core::Real	protocols::membrane::mem_bb_rmsd_no_super (Pose &native_pose, Pose &pose)
	Compute No Super Membrane RMSD. More...
core::Real	protocols::membrane::mem_all_atom_rmsd_no_super (Pose &native_pose, Pose &pose)
	Compute No Super Membrane RMSD - all atom without super. More...
core::Real	protocols::membrane::mem_bb_rmsd_with_super (Pose &native_pose, Pose &pose)
	Compute Membrane RMSD. More...
core::Real	protocols::membrane::mem_all_atom_rmsd_with_super (Pose &native_pose, Pose &pose)
	Compute Membrane RMSD - all atom with superposiiton. More...

Detailed Description

Metrics for membrane framework proteins.

Metris for evaluating membrane protein models. Includes currently a membrane RMSD metric w/ and w/o superimposition

Author

Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om)