md.cc File Reference

#include <protocols/cartesian/md.hh>
#include <core/id/AtomID.hh>
#include <core/optimization/types.hh>
#include <core/chemical/ResidueType.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/Atom.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/EnergyMap.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/ScoreFunction.hh>
#include <ObjexxFCL/string.functions.hh>
#include <ObjexxFCL/format.hh>
#include <iostream>
#include <fstream>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>
#include <numeric/NumericTraits.hh>
#include <numeric/random/random.fwd.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::cartesian

Functions
static thread_local basic::Tracer	protocols::cartesian::TR ("core.optimization.md")
float	protocols::cartesian::sqr (float t)