util.hh File Reference

#include <core/pose/Pose.fwd.hh>
#include <core/types.hh>
#include <core/id/AtomID.hh>
#include <core/id/AtomID_Map.hh>
#include <utility/vector1.fwd.hh>
#include <map>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::stepwise
	protocols::stepwise::modeler
	protocols::stepwise::modeler::align

Functions
core::Real	protocols::stepwise::modeler::align::get_rmsd (core::pose::Pose const &pose1, core::pose::Pose const &pose2, utility::vector1< core::Size > const &calc_rms_res, bool const check_align_at_superimpose_res, bool const check_switch)
core::Real	protocols::stepwise::modeler::align::get_rmsd (core::pose::Pose const &pose1, core::pose::Pose const &pose2, bool const check_align_at_superimpose_res, bool const check_switch)
void	protocols::stepwise::modeler::align::align_pose_and_add_rmsd_constraints (pose::Pose &pose, pose::PoseCOP align_pose, utility::vector1< Size > const &moving_res_list, Real const rmsd_screen)
Real	protocols::stepwise::modeler::align::superimpose_with_stepwise_aligner (pose::Pose &pose, pose::Pose const &align_pose, bool const superimpose_over_all_instantiated)
Real	protocols::stepwise::modeler::align::superimpose_pose_legacy (pose::Pose &mod_pose, pose::Pose const &ref_pose, std::map< Size, Size > const &res_map)
	Superimpose mod_pose onto ref_pose using the mapping of residues from mod_pose to ref_pose given by res_map. Simple wrapper around superimpose_pose using IDs. More...
id::AtomID_Map< id::AtomID >	protocols::stepwise::modeler::align::create_aligment_id_map_legacy (pose::Pose const &mod_pose, pose::Pose const &ref_pose, utility::vector1< core::Size > const &superimpose_res)
id::AtomID_Map< id::AtomID >	protocols::stepwise::modeler::align::create_aligment_id_map_legacy (pose::Pose const &mod_pose, pose::Pose const &ref_pose, std::map< core::Size, core::Size > res_map)

Detailed Description

Detailed:

Author

Rhiju Das, rhiju.nosp@m.@sta.nosp@m.nford.nosp@m..edu