Here is a list of all namespace members with links to the namespace documentation for each member:

- o -

• O : core::chemical::element
• O2H : core::chemical::rna
• O2PRIME : core::chemical::rna
• O_p_sp2 : core::chemical::orbitals
• O_p_sp2_bb : core::chemical::orbitals
• O_p_sp3 : core::chemical::orbitals
• O_pi_sp2 : core::chemical::orbitals
• O_pi_sp2_bb : core::chemical::orbitals
• ObserverCacheAP : core::pose::datacache
• ObserverCacheCAP : core::pose::datacache
• ObserverCacheCOP : core::pose::datacache
• ObserverCacheOP : core::pose::datacache
• Obsolet_NamedAtomPairConstraintCOP : core::scoring::constraints
• Obsolet_NamedAtomPairConstraintOP : core::scoring::constraints
• occ_sol_exact : core::scoring
• occ_sol_fitted : core::scoring
• occ_sol_fitted_onebody : core::scoring
• OccFitParam : core::scoring::geometric_solvation
• OccFitParam_amp : core::scoring::geometric_solvation
• OccFitParam_cos_angle_mu : core::scoring::geometric_solvation
• OccFitParam_dist_mu : core::scoring::geometric_solvation
• OccFitParam_max_sq_dist : core::scoring::geometric_solvation
• OccFitParam_min_cos_angle : core::scoring::geometric_solvation
• OccFitParam_num_params : core::scoring::geometric_solvation
• OccFitParam_twice_cos_angle_sigma_sq : core::scoring::geometric_solvation
• OccFitParam_twice_dist_sigma_sq : core::scoring::geometric_solvation
• OccludedHbondSolEnergy_onebodyCreator_registrator : core::init
• OccludedHbondSolEnergyCreator_registrator : core::init
• OCTREE : core::conformation
• off_rotamer_pack() : core::pack
• off_rotamer_pack_optimize() : core::pack
• off_rotamer_pack_setup() : core::pack
• off_rotamer_pack_update_pose() : core::pack
• ok_annotations : core::io::rna
• omega : core::scoring
• OMEGA : core::scoring
• omega2b_offset : core::scoring
• omega_torsion() : core::id
• omega_torsion_beta_aa() : core::id
• OmegaTetherCOP : core::scoring
• OmegaTetherEnergyCOP : core::scoring::methods
• OmegaTetherEnergyCreator_registrator : core::init
• OmegaTetherEnergyOP : core::scoring::methods
• OmegaTetherOP : core::scoring
• ONE : core::pack::dunbrack
• OneBodyEnergyCOP : core::scoring::methods
• OneBodyEnergyOP : core::scoring::methods
• oneletter2aa() : core::chemical
• oneletter_code_from_aa() : core::chemical
• oneletter_code_specifies_aa() : core::chemical
• onError() : core::pack::task
• OneToAllEnergyContainerOP : core::scoring
• OneToAllNeighborIteratorOP : core::scoring
• OnTheFlyInteractionGraphCOP : core::pack::interaction_graph
• OnTheFlyInteractionGraphOP : core::pack::interaction_graph
• OperateOnCertainResiduesCOP : core::pack::task::operation
• OperateOnCertainResiduesCreator_registrator : core::init
• OperateOnCertainResiduesOP : core::pack::task::operation
• OperateOnResidueSubsetCOP : core::pack::task::operation
• OperateOnResidueSubsetCreator_registrator : core::init
• OperateOnResidueSubsetOP : core::pack::task::operation
• operator!=() : core::chemical , core::conformation::symmetry , core::kinematics , core::pose::full_model_info , core::scoring::hbonds , core::scoring::methods
• operator*() : core::kinematics
• operator++() : core::chemical , core::scoring::carbohydrates
• operator<() : core::chemical , core::kinematics , core::scoring::etable , core::sequence
• operator<<() : core::chemical::carbohydrates , core::chemical::gasteiger , core::chemical , core::conformation::membrane , core::conformation , core::conformation::symmetry , core::environment , core::fragment , core::fragment::picking_old::vall::scores , core::id , core::indexed_structure_store , core::io::pdb , core::kinematics , core::optimization , core::pack::interaction_graph , core::pack::task , core::pose::full_model_info , core::pose , core::scoring::constraints , core::scoring::dssp , core::scoring::elec , core::scoring::etable::etrie , core::scoring::etable , core::scoring::func , core::scoring::hbonds::hbtrie , core::scoring::hbonds , core::scoring::loop_graph , core::scoring::methods , core::scoring::mm::mmtrie , core::scoring::mm , core::scoring::motif , core::scoring , core::scoring::packstat , core::scoring::rna , core::sequence
• operator==() : core::chemical , core::conformation::symmetry , core::kinematics , core::pose::full_model_info , core::scoring::etable , core::scoring::hbonds , core::scoring::methods , core::scoring , core::scoring::rna
• operator>>() : core::chemical , core::conformation::symmetry , core::fragment , core::id , core::kinematics , core::pose::full_model_info , core::scoring::dssp , core::scoring::motif , core::scoring , core::scoring::packstat , core::sequence
• OptCysHGAP : core::pack::task::operation
• OptCysHGCAP : core::pack::task::operation
• OptCysHGCOP : core::pack::task::operation
• OptCysHGCreator_registrator : core::init
• OptCysHGOP : core::pack::task::operation
• OptHAP : core::pack::task::operation
• OptHCAP : core::pack::task::operation
• OptHCOP : core::pack::task::operation
• OptHCreator_registrator : core::init
• OptHOP : core::pack::task::operation
• optimal_water_distance : core::scoring::methods
• optimize_H_and_notify() : core::pack
• optimizeH() : core::pack
• orbital_type_enum : core::chemical::orbitals
• OrbitalBond : core::chemical
• OrbitalBondOrder : core::chemical
• OrbitalCOP : core::chemical
• OrbitalCOPs : core::chemical
• OrbitalIndices : core::chemical
• OrbitalOP : core::chemical
• OrbitalOPs : core::chemical
• orbitals_hpol_bb : core::scoring
• OrbitalsLookupCOP : core::scoring::orbitals
• OrbitalsLookupOP : core::scoring::orbitals
• OrbitalsScoreCreator_registrator : core::init
• OrbitalsScoreOP : core::scoring::orbitals
• OrbitalTypeSetAP : core::chemical::orbitals
• OrbitalTypeSetCAP : core::chemical::orbitals
• OrbitalTypeSetCOP : core::chemical::orbitals
• OrbitalTypeSetOP : core::chemical::orbitals
• ORDERED_SEQUENTIAL : core::conformation::symmetry
• OrderedFragSetCOP : core::fragment
• OrderedFragSetOP : core::fragment
• orient_residue_for_ideal_bond() : core::conformation
• OrResidueSelectorCOP : core::pack::task::residue_selector
• OrResidueSelectorOP : core::pack::task::residue_selector
• Os : core::chemical::element
• oshi : core::scoring::rna::chemical_shift
• other_pose : core::scoring
• OtherPoseEnergyCOP : core::scoring::methods
• OtherPoseEnergyCreator_registrator : core::init
• OtherPoseEnergyOP : core::scoring::methods
• OutEdgeIter : core::chemical
• OutEdgeIterPair : core::chemical
• output_boolean() : core::pose::rna
• output_interaction_graph_memory_usage : core::graph
• output_packstat_pdb() : core::scoring::packstat
• overlap() : core::scoring::packstat
• overlap_chainbreak : core::scoring