Rosetta Core  2015.25
Namespaces | Typedefs | Functions | Variables
init.cc File Reference

options system initialization routines More...

#include <time.h>
#include <core/init/init.hh>
#include <core/svn_version.hh>
#include <core/types.hh>
#include <basic/options/option.hh>
#include <utility/basic_sys_util.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/io/izstream.hh>
#include <basic/Tracer.hh>
#include <basic/prof.hh>
#include <core/init/score_function_corrections.hh>
#include <core/scoring/constraints/ConstraintsEnergyCreator.hh>
#include <core/scoring/disulfides/CentroidDisulfideEnergyCreator.hh>
#include <core/scoring/disulfides/DisulfideMatchingEnergyCreator.hh>
#include <core/scoring/disulfides/FullatomDisulfideEnergyCreator.hh>
#include <core/scoring/etable/EtableEnergyCreator.hh>
#include <core/scoring/hbonds/HBondEnergyCreator.hh>
#include <core/scoring/methods/EnergyMethodRegistrator.hh>
#include <core/scoring/methods/CenPairEnergyCreator.hh>
#include <core/scoring/methods/ChainbreakEnergyCreator.hh>
#include <core/scoring/methods/ContactOrderEnergyCreator.hh>
#include <core/scoring/methods/EnvEnergyCreator.hh>
#include <core/scoring/methods/EnvSmoothEnergyCreator.hh>
#include <core/scoring/methods/IntermolEnergyCreator.hh>
#include <core/scoring/methods/MissingEnergyCreator.hh>
#include <core/scoring/methods/NMerRefEnergyCreator.hh>
#include <core/scoring/methods/NMerPSSMEnergyCreator.hh>
#include <core/scoring/methods/NMerSVMEnergyCreator.hh>
#include <core/scoring/methods/OmegaTetherEnergyCreator.hh>
#include <core/scoring/methods/OtherPoseEnergyCreator.hh>
#include <core/scoring/methods/P_AA_EnergyCreator.hh>
#include <core/scoring/methods/P_AA_pp_EnergyCreator.hh>
#include <core/scoring/methods/PackStatEnergyCreator.hh>
#include <core/scoring/methods/PairEnergyCreator.hh>
#include <core/scoring/methods/PeptideBondEnergyCreator.hh>
#include <core/scoring/methods/ProClosureEnergyCreator.hh>
#include <core/scoring/methods/BurialEnergyCreator.hh>
#include <core/scoring/methods/RG_Energy_FastCreator.hh>
#include <core/scoring/methods/RG_LocalEnergyCreator.hh>
#include <core/scoring/methods/SA_EnergyCreator.hh>
#include <core/scoring/methods/D2H_SA_EnergyCreator.hh>
#include <core/scoring/methods/ProQ_EnergyCreator.hh>
#include <core/scoring/methods/RMS_EnergyCreator.hh>
#include <core/scoring/methods/Rama2BOffsetEnergyCreator.hh>
#include <core/scoring/methods/RamachandranEnergy2BCreator.hh>
#include <core/scoring/methods/RamachandranEnergyCreator.hh>
#include <core/scoring/methods/ReferenceEnergyCreator.hh>
#include <core/scoring/methods/ReferenceEnergyNoncanonicalCreator.hh>
#include <core/scoring/methods/SecondaryStructureEnergyCreator.hh>
#include <core/scoring/methods/carbohydrates/SugarBackboneEnergyCreator.hh>
#include <core/scoring/methods/dfire/DFIRE_EnergyCreator.hh>
#include <core/scoring/methods/vall_lookback/VallLookbackEnergyCreator.hh>
#include <core/scoring/vdwaals/VDW_EnergyCreator.hh>
#include <core/scoring/methods/GoapEnergyCreator.hh>
#include <core/pack/dunbrack/DunbrackEnergyCreator.hh>
#include <core/pack/dunbrack/cenrot/CenRotDunEnergyCreator.hh>
#include <core/scoring/carbon_hbonds/CarbonHBondEnergyCreator.hh>
#include <core/scoring/custom_pair_distance/FullatomCustomPairDistanceEnergyCreator.hh>
#include <core/scoring/methods/CustomAtomPairEnergyCreator.hh>
#include <core/scoring/electron_density/FastDensEnergyCreator.hh>
#include <core/scoring/electron_density/ElecDensCenEnergyCreator.hh>
#include <core/scoring/electron_density/ElecDensAllAtomCenEnergyCreator.hh>
#include <core/scoring/electron_density/ElecDensEnergyCreator.hh>
#include <core/scoring/electron_density/PattersonCorrEnergyCreator.hh>
#include <core/scoring/cryst/XtalMLEnergyCreator.hh>
#include <core/scoring/electron_density_atomwise/ElecDensAtomwiseEnergyCreator.hh>
#include <core/scoring/geometric_solvation/ExactOccludedHbondSolEnergyCreator.hh>
#include <core/scoring/geometric_solvation/ContextDependentGeometricSolEnergyCreator.hh>
#include <core/scoring/geometric_solvation/ContextIndependentGeometricSolEnergyCreator.hh>
#include <core/scoring/geometric_solvation/OccludedHbondSolEnergyCreator.hh>
#include <core/scoring/geometric_solvation/OccludedHbondSolEnergy_onebodyCreator.hh>
#include <core/scoring/elec/FA_ElecEnergyCreator.hh>
#include <core/scoring/elec/FA_GrpElecEnergyCreator.hh>
#include <core/scoring/elec/FA_ElecEnergyAroAroCreator.hh>
#include <core/scoring/elec/FA_ElecEnergyAroAllCreator.hh>
#include <core/scoring/elec/RNA_FA_ElecEnergyCreator.hh>
#include <core/scoring/hackaro/HackAroEnergyCreator.hh>
#include <core/scoring/dna/DNAChiEnergyCreator.hh>
#include <core/scoring/dna/DNATorsionEnergyCreator.hh>
#include <core/scoring/methods/DNA_BaseEnergyCreator.hh>
#include <core/scoring/methods/DirectReadoutEnergyCreator.hh>
#include <core/scoring/methods/DistanceChainbreakEnergyCreator.hh>
#include <core/scoring/methods/Fa_MbenvEnergyCreator.hh>
#include <core/scoring/methods/Fa_MbsolvEnergyCreator.hh>
#include <core/scoring/methods/FreeDOF_EnergyCreator.hh>
#include <core/scoring/methods/HybridVDW_EnergyCreator.hh>
#include <core/scoring/methods/GenBornEnergyCreator.hh>
#include <core/scoring/facts/FACTSEnergyCreator.hh>
#include <core/scoring/methods/LK_PolarNonPolarEnergyCreator.hh>
#include <core/scoring/methods/LK_hackCreator.hh>
#include <core/scoring/methods/LK_BallEnergyCreator.hh>
#include <core/scoring/methods/LinearChainbreakEnergyCreator.hh>
#include <core/scoring/methods/MMBondAngleEnergyCreator.hh>
#include <core/scoring/methods/MMBondLengthEnergyCreator.hh>
#include <core/scoring/methods/CartesianBondedEnergyCreator.hh>
#include <core/scoring/methods/MMTorsionEnergyCreator.hh>
#include <core/scoring/methods/MMLJEnergyIntraCreator.hh>
#include <core/scoring/methods/MMLJEnergyInterCreator.hh>
#include <core/scoring/methods/MembraneCbetaEnergyCreator.hh>
#include <core/scoring/methods/MembraneCenPairEnergyCreator.hh>
#include <core/scoring/methods/MembraneEnvEnergyCreator.hh>
#include <core/scoring/methods/MembraneEnvPenaltiesCreator.hh>
#include <core/scoring/methods/MembraneLipoCreator.hh>
#include <core/scoring/methods/MembraneEnvSmoothEnergyCreator.hh>
#include <core/scoring/membrane/MPPairEnergyCreator.hh>
#include <core/scoring/membrane/MPEnvEnergyCreator.hh>
#include <core/scoring/membrane/MPCBetaEnergyCreator.hh>
#include <core/scoring/membrane/MPNonHelixPenaltyCreator.hh>
#include <core/scoring/membrane/MPTerminiPenaltyCreator.hh>
#include <core/scoring/membrane/MPTMProjPenaltyCreator.hh>
#include <core/scoring/membrane/FaMPEnvEnergyCreator.hh>
#include <core/scoring/membrane/FaMPSolvEnergyCreator.hh>
#include <core/scoring/membrane/FaMPEnvSmoothEnergyCreator.hh>
#include <core/scoring/methods/pHEnergyCreator.hh>
#include <core/scoring/methods/PoissonBoltzmannEnergyCreator.hh>
#include <core/scoring/methods/ChemicalShiftAnisotropyEnergyCreator.hh>
#include <core/scoring/methods/DipolarCouplingEnergyCreator.hh>
#include <core/scoring/methods/ResidualDipolarCouplingEnergyCreator.hh>
#include <core/scoring/methods/ResidualDipolarCouplingEnergy_RohlCreator.hh>
#include <core/scoring/methods/SmoothCenPairEnergyCreator.hh>
#include <core/scoring/methods/SmoothEnvEnergyCreator.hh>
#include <core/scoring/methods/CenRotPairEnergyCreator.hh>
#include <core/scoring/methods/CenRotEnvEnergyCreator.hh>
#include <core/scoring/methods/CenHBEnergyCreator.hh>
#include <core/scoring/methods/SuckerEnergyCreator.hh>
#include <core/scoring/methods/GaussianOverlapEnergyCreator.hh>
#include <core/scoring/methods/YHHPlanarityEnergyCreator.hh>
#include <core/pack/interaction_graph/SurfaceEnergyCreator.hh>
#include <core/pack/interaction_graph/HPatchEnergyCreator.hh>
#include <core/scoring/magnesium/MgEnergyCreator.hh>
#include <core/scoring/magnesium/RNA_MgPointEnergyCreator.hh>
#include <core/scoring/methods/SymmetricLigandEnergyCreator.hh>
#include <core/scoring/methods/UnfoldedStateEnergyCreator.hh>
#include <core/scoring/methods/SplitUnfoldedTwoBodyEnergyCreator.hh>
#include <core/scoring/methods/WaterAdductHBondEnergyCreator.hh>
#include <core/scoring/methods/WaterAdductIntraEnergyCreator.hh>
#include <core/scoring/nv/NVscoreCreator.hh>
#include <core/scoring/orbitals/OrbitalsScoreCreator.hh>
#include <core/scoring/interface_/DDPscoreCreator.hh>
#include <core/scoring/packing/HolesEnergyCreator.hh>
#include <core/scoring/packing/SurfVolEnergyCreator.hh>
#include <core/scoring/packing/SurfEnergyCreator.hh>
#include <core/scoring/rna/RG_Energy_RNACreator.hh>
#include <core/scoring/rna/RNA_BulgeEnergyCreator.hh>
#include <core/scoring/rna/RNA_FullAtomStackingEnergyCreator.hh>
#include <core/scoring/rna/RNA_JR_SuiteEnergyCreator.hh>
#include <core/scoring/rna/RNA_LJ_BaseEnergyCreator.hh>
#include <core/scoring/rna/RNA_PairwiseLowResolutionEnergyCreator.hh>
#include <core/scoring/rna/RNA_SugarCloseEnergyCreator.hh>
#include <core/scoring/rna/RNA_SuiteEnergyCreator.hh>
#include <core/scoring/rna/RNA_TorsionEnergyCreator.hh>
#include <core/scoring/rna/RNA_VDW_EnergyCreator.hh>
#include <core/scoring/rna/RNA_FullAtomVDW_BasePhosphateCreator.hh>
#include <core/scoring/rna/StackElecEnergyCreator.hh>
#include <core/scoring/rna/chemical_shift/RNA_ChemicalShiftEnergyCreator.hh>
#include <core/scoring/rna/data/RNA_ChemicalMappingEnergyCreator.hh>
#include <core/scoring/rna/data/RNA_DataBackboneEnergyCreator.hh>
#include <core/scoring/loop_graph/LoopCloseEnergyCreator.hh>
#include <core/scoring/sym_e/symECreator.hh>
#include <core/scoring/saxs/FastSAXSEnergyCreator.hh>
#include <core/scoring/saxs/SAXSEnergyCreator.hh>
#include <core/scoring/saxs/SAXSEnergyCreatorFA.hh>
#include <core/scoring/saxs/SAXSEnergyCreatorCEN.hh>
#include <core/scoring/fiber_diffraction/FiberDiffractionEnergyCreator.hh>
#include <core/scoring/fiber_diffraction/FiberDiffractionEnergyDensCreator.hh>
#include <core/scoring/constraints/ConstraintFactory.hh>
#include <core/scoring/constraints/BasicConstraintCreators.hh>
#include <core/pack/dunbrack/DunbrackConstraintCreator.hh>
#include <core/scoring/constraints/SequenceProfileConstraintCreator.hh>
#include <core/io/silent/SilentStructFactory.hh>
#include <core/io/silent/BasicSilentStructCreators.hh>
#include <core/import_pose/PDBSilentStructCreator.hh>
#include <core/sequence/SequenceFactory.hh>
#include <core/sequence/BasicSequenceCreators.hh>
#include <core/pack/task/operation/TaskOperationRegistrator.hh>
#include <core/pack/task/operation/TaskOperationCreators.hh>
#include <core/pack/task/operation/OperateOnCertainResiduesCreator.hh>
#include <core/pack/task/operation/OperateOnResidueSubsetCreator.hh>
#include <core/pack/task/operation/NoRepackDisulfidesCreator.hh>
#include <core/pack/task/operation/OptCysHGCreator.hh>
#include <core/pack/task/operation/OptHCreator.hh>
#include <core/pack/task/operation/ResLvlTaskOperationRegistrator.hh>
#include <core/pack/task/operation/ResLvlTaskOperationCreators.hh>
#include <core/pack/task/operation/ResFilterRegistrator.hh>
#include <core/pack/task/operation/ResFilterCreators.hh>
#include <core/pack/task/operation/ReplicateTaskCreator.hh>
#include <core/pack/task/residue_selector/ResidueSelectorCreators.hh>
#include <core/pack/task/residue_selector/ResidueSelectorRegistrator.hh>
#include <platform/types.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <cstring>
#include <fstream>
#include <sstream>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/resource_manager/ResourceLoaderRegistrator.hh>
#include <core/conformation/symmetry/SymmDataLoaderCreator.hh>
#include <core/conformation/symmetry/SymmDataOptionsCreator.hh>
#include <core/io/silent/SilentFileLoaderCreator.hh>
#include <core/io/silent/SilentFileOptionsCreator.hh>
#include <core/import_pose/PoseFromPDBLoaderCreator.hh>
#include <core/import_pose/import_pose_options_creator.hh>
#include <basic/resource_manager/ResourceOptionsRegistrator.hh>
#include <core/scoring/electron_density/ElectronDensityLoaderCreator.hh>
#include <core/scoring/electron_density/ElectronDensityOptionsCreator.hh>
#include <core/scoring/fiber_diffraction/FiberDiffractionLoaderCreator.hh>
#include <core/scoring/fiber_diffraction/FiberDiffractionOptionsCreator.hh>
#include <core/chemical/ResidueLoaderCreator.hh>
#include <core/chemical/ResidueLoaderOptionsCreator.hh>
#include <basic/options/keys/LoopModel.OptionKeys.gen.hh>
#include <core/pack/task/operation/ResFilterFactory.hh>
#include <core/pack/task/operation/ResLvlTaskOperationFactory.hh>
#include <core/pack/task/operation/TaskOperationFactory.hh>
#include <core/scoring/ScoringManager.hh>
#include <basic/init.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>

Namespaces

 core
 A class for reading in the atom type properties.
 
 core::init
 

Typedefs

typedef std::ostringstream ostringstream_t
 

Functions

static thread_local basic::Tracer core::init::TR ("core.init")
 
void core::init::init_mpi (int, char **)
 
void core::init::init_options (int argc, char *argv[])
 Initialize the option system, which manages command line options. More...
 
void core::init::init_complex_options ()
 After the tracers have been initialized, now go back and modify some of the values in the options system based on (hard coded) inter-flag relationships. Some of these relationships are set in the basic::options::process() function, some of them are handled in this .cc file. More...
 
void core::init::init_tracers ()
 Tracers control output to std::cout and std::cerr. More...
 
void core::init::init_source_revision ()
 Choose to output source version control information? More...
 
void core::init::init_paths ()
 Setup basic search paths. More...
 
void core::init::check_deprecated_flags ()
 Check for deprecated flags specified by the user and output error messages if necessary. More...
 
void core::init::report_application_command (int argc, char *argv[])
 Describe the application execution command. More...
 
void core::init::init_random_number_generators ()
 Initalize random number generators. More...
 
void core::init::init_random_generators (int const start_seed, std::string const &RGtype)
 Initialize random generator systems (and send debug io to tracer with seed/mode info). More...
 
void core::init::random_delay ()
 Choose to randomly delay execution to desyncronize parallel execution. More...
 
void core::init::locate_rosetta_database ()
 Locate rosetta_database. More...
 
void core::init::init_profiling ()
 Profiling measures execution performance. More...
 
void core::init::init_resources ()
 Set up system resources. More...
 
void core::init::init (int argc, char *argv[])
 Init basic core systems: options system, random system. More...
 
void core::init::init (utility::vector1< std::string > const &args)
 wrapper for core system Init More...
 

Variables

static EnergyMethodRegistrator
< scoring::constraints::ConstraintsEnergyCreator > 		core::init::ConstraintsEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::disulfides::CentroidDisulfideEnergyCreator > 		core::init::CentroidDisulfideEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::disulfides::DisulfideMatchingEnergyCreator > 		core::init::DisulfideMatchingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::disulfides::FullatomDisulfideEnergyCreator > 		core::init::FullatomDisulfideEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::etable::EtableEnergyCreator > 		core::init::EtableEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::etable::EtableClassicIntraEnergyCreator > 		core::init::EtableClassicIntraEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::hbonds::HBondEnergyCreator > 		core::init::HBondEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ChainbreakEnergyCreator > 		core::init::ChainbreakEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CenPairEnergyCreator > 		core::init::CenPairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ContactOrderEnergyCreator > 		core::init::ContactOrderEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::IntermolEnergyCreator > 		core::init::IntermolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MissingEnergyCreator > 		core::init::MissingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::EnvEnergyCreator > 		core::init::EnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::EnvSmoothEnergyCreator > 		core::init::EnvSmoothEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::OmegaTetherEnergyCreator > 		core::init::OmegaTetherEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::OtherPoseEnergyCreator > 		core::init::OtherPoseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::NMerRefEnergyCreator > 		core::init::NMerRefEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::NMerPSSMEnergyCreator > 		core::init::NMerPSSMEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::NMerSVMEnergyCreator > 		core::init::NMerSVMEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::P_AA_EnergyCreator > 		core::init::P_AA_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::P_AA_pp_EnergyCreator > 		core::init::P_AA_pp_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::PackStatEnergyCreator > 		core::init::PackStatEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::PairEnergyCreator > 		core::init::PairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::PeptideBondEnergyCreator > 		core::init::PeptideBondEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ProClosureEnergyCreator > 		core::init::ProClosureEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::BurialEnergyCreator > 		core::init::BurialCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::RG_Energy_FastCreator > 		core::init::RG_Energy_FastCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::RG_LocalEnergyCreator > 		core::init::RG_LocalEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SA_EnergyCreator > 		core::init::SA_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::D2H_SA_EnergyCreator > 		core::init::D2H_SA_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ProQ_EnergyCreator > 		core::init::ProQ_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::RMS_EnergyCreator > 		core::init::RMS_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::Rama2BOffsetEnergyCreator > 		core::init::Ramac2BOffsetEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::RamachandranEnergy2BCreator > 		core::init::RamachandranEnergy2BCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::RamachandranEnergyCreator > 		core::init::RamachandranEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ReferenceEnergyCreator > 		core::init::ReferenceEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ReferenceEnergyNoncanonicalCreator > 		core::init::ReferenceEnergyNoncanonicalCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SecondaryStructureEnergyCreator > 		core::init::SecondaryStructureEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::dfire::DFIRE_EnergyCreator > 		core::init::DFIRE_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::VallLookbackEnergyCreator > 		core::init::VallLookbackEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::vdwaals::VDW_EnergyCreator > 		core::init::VDW_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::GoapEnergyCreator > 		core::init::GoapEnergyCreator_registrator
 
static EnergyMethodRegistrator
< carbohydrates::SugarBackboneEnergyCreator > 		core::init::SugarBackboneEnergyCreator_registrator
 
static EnergyMethodRegistrator
< pack::dunbrack::DunbrackEnergyCreator > 		core::init::DunbrackEnergyCreator_registrator
 
static EnergyMethodRegistrator
< pack::dunbrack::cenrot::CenRotDunEnergyCreator > 		core::init::CenRotDunEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::nv::NVscoreCreator > 		core::init::NVscoreCreator_registrator
 
static EnergyMethodRegistrator
< scoring::orbitals::OrbitalsScoreCreator > 		core::init::OrbitalsScoreCreator_registrator
 
static EnergyMethodRegistrator
< scoring::interface_::DDPscoreCreator > 		core::init::DDPscoreCreator_registrator
 
static EnergyMethodRegistrator
< scoring::carbon_hbonds::CarbonHBondEnergyCreator > 		core::init::CarbonHBondEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::custom_pair_distance::FullatomCustomPairDistanceEnergyCreator > 		core::init::FullatomCustomPairDistanceEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CustomAtomPairEnergyCreator > 		core::init::CustomAtomPairEnergy_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density::FastDensEnergyCreator > 		core::init::FastDensEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density::ElecDensCenEnergyCreator > 		core::init::ElecDensCenEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density::ElecDensAllAtomCenEnergyCreator > 		core::init::ElecDensAllAtomCenEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density::ElecDensEnergyCreator > 		core::init::ElecDensEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density::PattersonCorrEnergyCreator > 		core::init::PattersonCorrEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::cryst::XtalMLEnergyCreator > 		core::init::XtalMLEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density_atomwise::ElecDensAtomwiseEnergyCreator > 		core::init::ElecDensAtomwiseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::geometric_solvation::ExactOccludedHbondSolEnergyCreator > 		core::init::ExactOccludedHbondSolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::geometric_solvation::ContextDependentGeometricSolEnergyCreator > 		core::init::ContextDependentGeometricSolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::geometric_solvation::ContextIndependentGeometricSolEnergyCreator > 		core::init::ContextIndependentGeometricSolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::geometric_solvation::OccludedHbondSolEnergyCreator > 		core::init::OccludedHbondSolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::geometric_solvation::OccludedHbondSolEnergy_onebodyCreator > 		core::init::OccludedHbondSolEnergy_onebodyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::elec::FA_ElecEnergyCreator > 		core::init::FA_ElecEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::elec::RNA_FA_ElecEnergyCreator > 		core::init::RNA_FA_ElecEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::elec::FA_ElecEnergyAroAroCreator > 		core::init::FA_ElecEnergyAroAroCreator_registrator
 
static EnergyMethodRegistrator
< scoring::elec::FA_ElecEnergyAroAllCreator > 		core::init::FA_ElecEnergyAroAllCreator_registrator
 
static EnergyMethodRegistrator
< scoring::elec::FA_GrpElecEnergyCreator > 		core::init::FA_GrpElecEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::hackaro::HackAroEnergyCreator > 		core::init::HackAroEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::dna::DNAChiEnergyCreator > 		core::init::DNAChiEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::dna::DNATorsionEnergyCreator > 		core::init::DNATorsionEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::loop_graph::LoopCloseEnergyCreator > 		core::init::LoopCloseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::magnesium::MgEnergyCreator > 		core::init::MgEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::magnesium::RNA_MgPointEnergyCreator > 		core::init::RNA_MgPointEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::DNA_BaseEnergyCreator > 		core::init::DNA_BaseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::DirectReadoutEnergyCreator > 		core::init::DirectReadoutEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::DistanceChainbreakEnergyCreator > 		core::init::DistanceChainbreakEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::Fa_MbenvEnergyCreator > 		core::init::Fa_MbenvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::Fa_MbsolvEnergyCreator > 		core::init::Fa_MbsolvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::FreeDOF_EnergyCreator > 		core::init::FreeDOF_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::GenBornEnergyCreator > 		core::init::GenBornEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::FACTSEnergyCreator > 		core::init::FACTSEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::HybridVDW_EnergyCreator > 		core::init::HybridVDW_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::LK_PolarNonPolarEnergyCreator > 		core::init::LK_PolarNonPolarEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::LK_hackCreator > 		core::init::LK_hackCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::LK_BallEnergyCreator > 		core::init::LK_BallEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::LinearChainbreakEnergyCreator > 		core::init::LinearChainbreakEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MMBondAngleEnergyCreator > 		core::init::MMBondAngleEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CartesianBondedEnergyCreator > 		core::init::CartesianBondedEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MMBondLengthEnergyCreator > 		core::init::MMBondLengthEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MMTorsionEnergyCreator > 		core::init::MMTorsionEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MMLJEnergyInterCreator > 		core::init::MMLJEnergyInterCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MMLJEnergyIntraCreator > 		core::init::MMLJEnergyIntraCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneCbetaEnergyCreator > 		core::init::MembraneCbetaEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneCenPairEnergyCreator > 		core::init::MembraneCenPairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneEnvEnergyCreator > 		core::init::MembraneEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneEnvPenaltiesCreator > 		core::init::MembraneEnvPenaltiesCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPPairEnergyCreator > 		core::init::MPPairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPEnvEnergyCreator > 		core::init::MPEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPCbetaEnergyCreator > 		core::init::MPCbetaEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPNonHelixPenaltyCreator > 		core::init::MPNonHelixPenaltyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPTerminiPenaltyCreator > 		core::init::MPTerminiPenaltyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPTMProjPenaltyCreator > 		core::init::MPTMProjPenaltyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::FaMPEnvEnergyCreator > 		core::init::FaMPEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::FaMPSolvEnergyCreator > 		core::init::FaMPSolvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::FaMPEnvSmoothEnergyCreator > 		core::init::FaMPEnvSMoothEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SmoothCenPairEnergyCreator > 		core::init::SmoothCenPairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SmoothEnvEnergyCreator > 		core::init::SmoothEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CenRotPairEnergyCreator > 		core::init::CenRotPairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CenRotEnvEnergyCreator > 		core::init::CenRotEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CenHBEnergyCreator > 		core::init::CenHBEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneLipoCreator > 		core::init::MembraneLipoCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneEnvSmoothEnergyCreator > 		core::init::MembraneEnvSmoothEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::pHEnergyCreator > 		core::init::pHEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ChemicalShiftAnisotropyEnergyCreator > 		core::init::ChemicalShiftAnisotropyEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::DipolarCouplingEnergyCreator > 		core::init::DipolarCouplingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ResidualDipolarCouplingEnergyCreator > 		core::init::ResidualDipolarCouplingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ResidualDipolarCouplingEnergy_RohlCreator > 		core::init::ResidualDipolarCouplingEnergy_RohlCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SuckerEnergyCreator > 		core::init::SuckerEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::GaussianOverlapEnergyCreator > 		core::init::GaussianOverlapEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::YHHPlanarityEnergyCreator > 		core::init::YYHPlanarityEnergyCreator_registrator
 
static EnergyMethodRegistrator
< pack::interaction_graph::SurfaceEnergyCreator > 		core::init::SurfaceEnergyCreator_registrator
 
static EnergyMethodRegistrator
< pack::interaction_graph::HPatchEnergyCreator > 		core::init::HPatchEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SymmetricLigandEnergyCreator > 		core::init::SymmetricLigandEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::UnfoldedStateEnergyCreator > 		core::init::UnfoldedStateEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SplitUnfoldedTwoBodyEnergyCreator > 		core::init::SplitUnfoldedTwoBodyEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::WaterAdductHBondEnergyCreator > 		core::init::WaterAdductHBondEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::WaterAdductIntraEnergyCreator > 		core::init::WaterAdductIntraEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::packing::HolesEnergyCreator > 		core::init::HolesEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::packing::SurfVolEnergyCreator > 		core::init::SurfVolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::packing::SurfEnergyCreator > 		core::init::SurfEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RG_Energy_RNACreator > 		core::init::RG_Energy_RNACreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_BulgeEnergyCreator > 		core::init::RNA_BulgeEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::data::RNA_ChemicalMappingEnergyCreator > 		core::init::RNA_ChemicalMappingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::data::RNA_DataBackboneEnergyCreator > 		core::init::RNA_DataBackboneEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_FullAtomStackingEnergyCreator > 		core::init::RNA_FullAtomStackingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_JR_SuiteEnergyCreator > 		core::init::RNA_JR_SuiteEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_LJ_BaseEnergyCreator > 		core::init::RNA_LJ_BaseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_PairwiseLowResolutionEnergyCreator > 		core::init::RNA_PairwiseLowResolutionEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_SugarCloseEnergyCreator > 		core::init::RNA_SugarCloseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_SuiteEnergyCreator > 		core::init::RNA_SuiteEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_TorsionEnergyCreator > 		core::init::RNA_TorsionEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_VDW_EnergyCreator > 		core::init::RNA_VDW_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_FullAtomVDW_BasePhosphateCreator > 		core::init::RNA_FullAtomVDW_BasePhosphateCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::StackElecEnergyCreator > 		core::init::StackElecEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::chemical_shift::RNA_ChemicalShiftEnergyCreator > 		core::init::NA_ChemicalShiftEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::sym_e::symECreator > 		core::init::symECreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::PoissonBoltzmannEnergyCreator > 		core::init::PoissonBoltzmannEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::saxs::FastSAXSEnergyCreator > 		core::init::FastSAXSEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::saxs::SAXSEnergyCreatorCEN > 		core::init::SAXSEnergyCreatorCEN_registrator
 
static EnergyMethodRegistrator
< scoring::saxs::SAXSEnergyCreatorFA > 		core::init::SAXSEnergyCreatorFA_registrator
 
static EnergyMethodRegistrator
< scoring::saxs::SAXSEnergyCreator > 		core::init::SAXSEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::fiber_diffraction::FiberDiffractionEnergyCreator > 		core::init::FiberDiffractionEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::fiber_diffraction::FiberDiffractionEnergyDensCreator > 		core::init::FiberDiffractionEnergyDensCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::AmbiguousConstraintCreator > 		core::init::AmbiguousConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::AmbiguousNMRConstraintCreator > 		core::init::AmbiguousNMRConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::AmbiguousNMRDistanceConstraintCreator > 		core::init::AmbiguousNMRDistanceConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::AngleConstraintCreator > 		core::init::AngleConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::AtomPairConstraintCreator > 		core::init::AtomPairConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::BigBinConstraintCreator > 		core::init::BigBinConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::CoordinateConstraintCreator > 		core::init::CoordinateConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::DihedralConstraintCreator > 		core::init::DihedralConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::DihedralPairConstraintCreator > 		core::init::DihedralPairConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::KofNConstraintCreator > 		core::init::KofNConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::LocalCoordinateConstraintCreator > 		core::init::LocalCoordinateConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::MultiConstraintCreator > 		core::init::MultiConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::NamedAngleConstraintCreator > 		core::init::NamedAngleConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::FabConstraintCreator > 		core::init::FabConstraintCreator_registrator
 
static ConstraintRegistrator
< core::pack::dunbrack::DunbrackConstraintCreator > 		core::init::DunbrackConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::SiteConstraintCreator > 		core::init::SiteConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::SiteConstraintResiduesCreator > 		core::init::SiteConstraintResiduesCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::SequenceProfileConstraintCreator > 		core::init::SequenceProfileConstraintCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::ProteinSilentStructCreator > 		core::init::ProteinSilentStructCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::ProteinSilentStruct_SinglePrecCreator > 		core::init::ProteinSilentStruct_SinglePrecCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::RNA_SilentStructCreator > 		core::init::RNA_SilentStructCreator_registrator
 
static SilentStructRegistrator
< core::import_pose::PDBSilentStructCreator > 		core::init::PDBSilentStructCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::BinarySilentStructCreator > 		core::init::BinarySilentStructCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::ScoreFileSilentStructCreator > 		core::init::ScoreFileSilentStructCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::ScoreJumpFileSilentStructCreator > 		core::init::ScoreJumpFileSilentStructCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::RigidBodySilentStructCreator > 		core::init::RigidBodySilentStructCreator_registrator
 
static SequenceRegistrator
< core::sequence::SimpleSequenceCreator > 		core::init::SimpleSequenceCreator_registrator
 
static SequenceRegistrator
< core::sequence::SequenceProfileCreator > 		core::init::SequenceProfileCreator_registrator
 
static SequenceRegistrator
< core::sequence::SequenceCouplingCreator > 		core::init::SequenceCouplingCreator_registrator
 
static SequenceRegistrator
< core::sequence::CompositeSequenceCreator > 		core::init::CompositeSequenceCreator_registrator
 
static
TaskOperationRegistrator
< RestrictYSDesignCreator > 		core::init::RestrictYSDesignCreator_registrator
 
static
TaskOperationRegistrator
< PreventRepackingCreator > 		core::init::PreventRepackingCreator_registrator
 
static
TaskOperationRegistrator
< PreserveCBetaCreator > 		core::init::PreserveCBetaCreator_registrator
 
static
TaskOperationRegistrator
< AppendRotamerSetCreator > 		core::init::AppendRotamerSetCreator_registrator
 
static
TaskOperationRegistrator
< AppendRotamerCreator > 		core::init::AppendRotamerCreator_registrator
 
static
TaskOperationRegistrator
< ExtraRotamersCreator > 		core::init::ExtraRotamersCreator_registrator
 
static
TaskOperationRegistrator
< ExtraChiCutoffCreator > 		core::init::ExtraChiCutoffCreator_registrator
 
static
TaskOperationRegistrator
< SetRotamerCouplingsCreator > 		core::init::SetRotamerCouplingsCreator_registrator
 
static
TaskOperationRegistrator
< SetRotamerLinksCreator > 		core::init::SetRotamerLinksCreator_registrator
 
static
TaskOperationRegistrator
< ReadResfileCreator > 		core::init::ReadResfileCreator_registrator
 
static
TaskOperationRegistrator
< ReadResfileAndObeyLengthEventsCreator > 		core::init::ReadResfileAndObeyLengthEventsCreator_registrator
 
static
TaskOperationRegistrator
< IncludeCurrentCreator > 		core::init::IncludeCurrentCreator_registrator
 
static
TaskOperationRegistrator
< InitializeExtraRotsFromCommandlineCreator > 		core::init::InitializeExtraRotsFromCommandlineCreator_registrator
 
static
TaskOperationRegistrator
< InitializeFromCommandlineCreator > 		core::init::InitializeFromCommandlineCreator_registrator
 
static
TaskOperationRegistrator
< ExtraRotamersGenericCreator > 		core::init::ExtraRotamersGenericCreator_registrator
 
static
TaskOperationRegistrator
< RotamerExplosionCreator > 		core::init::RotamerExplosionCreator_registrator
 
static
TaskOperationRegistrator
< RestrictAbsentCanonicalAASCreator > 		core::init::RestrictAbsentCanonicalAASCreator_registrator
 
static
TaskOperationRegistrator
< DisallowIfNonnativeCreator > 		core::init::DisallowIfNonnativeCreator_registrator
 
static
TaskOperationRegistrator
< RestrictResidueToRepackingCreator > 		core::init::RestrictResidueToRepackingCreator_registrator
 
static
TaskOperationRegistrator
< RestrictToRepackingCreator > 		core::init::RestrictToRepackingCreator_registrator
 
static
TaskOperationRegistrator
< OperateOnCertainResiduesCreator > 		core::init::OperateOnCertainResiduesCreator_registrator
 
static
TaskOperationRegistrator
< OperateOnResidueSubsetCreator > 		core::init::OperateOnResidueSubsetCreator_registrator
 
static
TaskOperationRegistrator
< NoRepackDisulfidesCreator > 		core::init::NoRepackDisulfidesCreator_registrator
 
static
TaskOperationRegistrator
< ReplicateTaskCreator > 		core::init::ReplicateTaskCreator_registrator
 
static
TaskOperationRegistrator
< OptCysHGCreator > 		core::init::OptCysHGCreator_registrator
 
static
TaskOperationRegistrator
< OptHCreator > 		core::init::OptHCreator_registrator
 
static
ResLvlTaskOperationRegistrator
< RestrictToRepackingRLTCreator > 		core::init::RestrictToRepackingRLTCreator_registrator
 
static
ResLvlTaskOperationRegistrator
< RestrictAbsentCanonicalAASRLTCreator > 		core::init::RestrictAbsentCanonicalAASRLTCreator_registrator
 
static
ResLvlTaskOperationRegistrator
< DisallowIfNonnativeRLTCreator > 		core::init::DisallowIfNonnativeRLTCreator_registrator
 
static
ResLvlTaskOperationRegistrator
< PreventRepackingRLTCreator > 		core::init::PreventRepackingRLTCreator_registrator
 
static
ResLvlTaskOperationRegistrator
< AddBehaviorRLTCreator > 		core::init::AddBehaviorRLTCreator_registrator
 
static ResFilterRegistrator
< ResidueHasPropertyCreator > 		core::init::ResidueHasPropertyCreator_registrator
 
static ResFilterRegistrator
< ResiduePDBInfoHasLabelCreator > 		core::init::ResiduePDBInfoHasLabelCreator_registrator
 
static ResFilterRegistrator
< ResidueLacksPropertyCreator > 		core::init::ResidueLacksPropertyCreator_registrator
 
static ResFilterRegistrator
< ResidueName3IsCreator > 		core::init::ResidueName3IsCreator_registrator
 
static ResFilterRegistrator
< ResidueName3IsntCreator > 		core::init::ResidueName3IsntCreator_registrator
 
static ResFilterRegistrator
< ResidueIndexIsCreator > 		core::init::ResidueIndexIsCreator_registrator
 
static ResFilterRegistrator
< ResidueIndexIsntCreator > 		core::init::ResidueIndexIsntCreator_registrator
 
static ResFilterRegistrator
< ResiduePDBIndexIsCreator > 		core::init::ResiduePDBIndexIsCreator_registrator
 
static ResFilterRegistrator
< ResiduePDBIndexIsntCreator > 		core::init::ResiduePDBIndexIsntCreator_registrator
 
static ResFilterRegistrator
< ChainIsCreator > 		core::init::ChainIsCreator_registrator
 
static ResFilterRegistrator
< ChainIsntCreator > 		core::init::ChainIsntCreator_registrator
 
static ResFilterRegistrator
< AnyResFilterCreator > 		core::init::AnyResFilterCreator_registrator
 
static ResFilterRegistrator
< AllResFilterCreator > 		core::init::AllResFilterCreator_registrator
 
static ResFilterRegistrator
< NoResFilterCreator > 		core::init::NoResFilterCreator_registrator
 
static ResFilterRegistrator
< ResidueTypeFilterCreator > 		core::init::ResidueTypeResFilterCreator_registrator
 
static
ResidueSelectorRegistrator
< AndResidueSelectorCreator > 		core::init::reg_AndResidueSelectorCreator
 
static
ResidueSelectorRegistrator
< ChainSelectorCreator > 		core::init::reg_ChainSelectorCreator
 
static
ResidueSelectorRegistrator
< ClashBasedRepackShellSelectorCreator > 		core::init::reg_ClashBasedRepackShellSelectorCreator
 
static
ResidueSelectorRegistrator
< InterGroupInterfaceByVectorSelectorCreator > 		core::init::reg_InterGroupInterfaceByVectorSelectorCreator
 
static
ResidueSelectorRegistrator
< JumpDownstreamSelectorCreator > 		core::init::reg_JumpDownstreamSelectorCreator
 
static
ResidueSelectorRegistrator
< JumpUpstreamSelectorCreator > 		core::init::reg_JumpUpstreamSelectorCreator
 
static
ResidueSelectorRegistrator
< NeighborhoodResidueSelectorCreator > 		core::init::reg_NeighborhoodResidueSelectorCreator
 
static
ResidueSelectorRegistrator
< NotResidueSelectorCreator > 		core::init::reg_NotResidueSelectorCreator
 
static
ResidueSelectorRegistrator
< NumNeighborsSelectorCreator > 		core::init::reg_NumNeighborsSelectorCreator
 
static
ResidueSelectorRegistrator
< OrResidueSelectorCreator > 		core::init::reg_OrResidueSelectorCreator
 
static
ResidueSelectorRegistrator
< ResidueIndexSelectorCreator > 		core::init::reg_ResidueIndexSelectorCreator
 
static
ResidueSelectorRegistrator
< ResidueNameSelectorCreator > 		core::init::reg_ResidueNameSelectorCreator
 
static
ResourceLoaderRegistrator
< core::conformation::symmetry::SymmDataLoaderCreator > 		core::init::SymmDataLoaderCreator_registrator
 
static
ResourceLoaderRegistrator
< core::io::silent::SilentFileLoaderCreator > 		core::init::SilentFileLoaderCreator_registrator
 
static
ResourceLoaderRegistrator
< core::import_pose::PoseFromPDBLoaderCreator > 		core::init::PoseFromPDBLoaderCreator_registrator
 
static
ResourceLoaderRegistrator
< core::scoring::electron_density::ElectronDensityLoaderCreator > 		core::init::ElectronDensityLoaderCreator_registrator
 
static
ResourceLoaderRegistrator
< core::scoring::fiber_diffraction::FiberDiffractionLoaderCreator > 		core::init::FiberDiffractionLoaderCreator_registrator
 
static
ResourceLoaderRegistrator
< core::chemical::ResidueLoaderCreator > 		core::init::ResidueLoaderCreator_registrator
 
static
ResourceOptionsRegistrator
< core::conformation::symmetry::SymmDataOptionsCreator > 		core::init::SymmDataOptionsCreator_registrator
 
static
ResourceOptionsRegistrator
< core::import_pose::ImportPoseOptionsCreator > 		core::init::ImportPoseOptionsCreator_registrator
 
static
ResourceOptionsRegistrator
< core::io::silent::SilentFileOptionsCreator > 		core::init::SilentFileOptionsCreator_registrator
 
static
ResourceOptionsRegistrator
< core::scoring::electron_density::ElectronDensityOptionsCreator > 		core::init::ElectronDensityOptionsCreator_registrator
 
static
ResourceOptionsRegistrator
< core::scoring::fiber_diffraction::FiberDiffractionOptionsCreator > 		core::init::FiberDiffractionOptionsCreator_registrator
 
static
ResourceOptionsRegistrator
< core::chemical::ResidueLoaderOptionsCreator > 		core::init::ResiudeLoaderOptionsCreator_registrator
 

Detailed Description

options system initialization routines

Author
Sergey Lyskov

Typedef Documentation

typedef std::ostringstream ostringstream_t
Generated on Wed Jun 24 2015 05:49:12 for Rosetta Core by   doxygen 1.8.7