VirtualSugarSampler.cc File Reference

#include <protocols/stepwise/modeler/rna/sugar/VirtualSugarSampler.hh>
#include <protocols/stepwise/modeler/rna/sugar/util.hh>
#include <protocols/stepwise/modeler/rna/phosphate/util.hh>
#include <protocols/stepwise/modeler/rna/checker/RNA_VDW_BinChecker.hh>
#include <protocols/stepwise/modeler/rna/checker/RNA_AtrRepChecker.hh>
#include <protocols/stepwise/modeler/rna/checker/RNA_ChainClosableGeometryChecker.hh>
#include <protocols/stepwise/modeler/rna/checker/RNA_ChainClosureChecker.hh>
#include <protocols/stepwise/modeler/working_parameters/StepWiseWorkingParameters.hh>
#include <protocols/stepwise/modeler/rna/util.hh>
#include <protocols/stepwise/modeler/rna/StepWiseRNA_OutputData.hh>
#include <protocols/stepwise/modeler/StepWiseModeler.hh>
#include <protocols/stepwise/modeler/options/StepWiseModelerOptions.hh>
#include <protocols/stepwise/sampler/rna/RNA_SuiteStepWiseSampler.hh>
#include <protocols/stepwise/sampler/rna/RNA_NucleosideStepWiseSampler.hh>
#include <protocols/farna/RNA_LoopCloser.hh>
#include <core/optimization/AtomTreeMinimizer.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <core/types.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/util.hh>
#include <core/chemical/VariantType.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/AtomType.hh>
#include <core/chemical/rna/util.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/rna/util.hh>
#include <core/pose/full_model_info/util.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/rna/RNA_TorsionPotential.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/constraints/util.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/EnergyMap.hh>
#include <core/scoring/methods/EnergyMethodOptions.hh>
#include <numeric/conversions.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>
#include <utility/tools/make_vector1.hh>
#include <basic/Tracer.hh>
#include <protocols/stepwise/modeler/protein/InputStreamWithResidueInfo.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::stepwise
	protocols::stepwise::modeler
	protocols::stepwise::modeler::rna
	protocols::stepwise::modeler::rna::sugar

Functions
static thread_local basic::Tracer	TR ("protocols.stepwise.modeler.rna.sugar.VirtualSugarSampler")

Function Documentation

static thread_local basic::Tracer TR ( "protocols.stepwise.modeler.rna.sugar.VirtualSugarSampler"  )

static