HelixBundleFeatures.cc File Reference

Search through a pose for sets of 3 helices and generate RMSD calculations between all pairs of them. More...

#include <core/types.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/Atom.hh>
#include <core/scoring/sasa.hh>
#include <core/pose/util.hh>
#include <core/pose/symmetry/util.hh>
#include <protocols/features/helixAssembly/HelixBundleFeatures.hh>
#include <protocols/features/helixAssembly/HelicalFragment.hh>
#include <utility/sql_database/DatabaseSessionManager.hh>
#include <utility/tag/Tag.hh>
#include <utility/LexicographicalIterator.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/EnergyGraph.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreType.hh>
#include <core/graph/Graph.hh>
#include <string>
#include <math.h>
#include <cppdb/frontend.h>
#include <basic/database/sql_utils.hh>
#include <basic/Tracer.hh>
#include <basic/options/util.hh>
#include <basic/database/schema_generator/PrimaryKey.hh>
#include <basic/database/schema_generator/ForeignKey.hh>
#include <basic/database/schema_generator/Column.hh>
#include <basic/database/schema_generator/Schema.hh>
#include <basic/database/schema_generator/Constraint.hh>
#include <numeric/PCA.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/xyzVector.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::features
	protocols::features::helixAssembly

Functions
static thread_local basic::Tracer	TR ("protocols.features.helixAssembly.HelixBundleFeatures")

Detailed Description

Search through a pose for sets of 3 helices and generate RMSD calculations between all pairs of them.

Author

Tim Jacobs

Function Documentation

static thread_local basic::Tracer TR ( "protocols.features.helixAssembly.HelixBundleFeatures"  )

static