Extender.cc File Reference

#include <protocols/star/Extender.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/keys/abinitio.OptionKeys.gen.hh>
#include <numeric/random/random.hh>
#include <numeric/random/WeightedReservoirSampler.hh>
#include <utility/exit.hh>
#include <utility/vector1.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/util.hh>
#include <core/fragment/SecondaryStructure.hh>
#include <core/id/SequenceMapping.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/rms_util.hh>
#include <core/sequence/SequenceAlignment.hh>
#include <protocols/comparative_modeling/util.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/loops/util.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::star

Functions
void	protocols::star::generate_extended_pose (Pose *extended_pose, const std::string &sequence)
void	protocols::star::copy_residues (const Pose &src, Size start, Size stop, Pose *dst)

Variables
static const Real	protocols::star::EXT_PHI = -150
static const Real	protocols::star::EXT_PSI = +150
static const Real	protocols::star::EXT_OMG = +180

Detailed Description

Author

Christopher Miles (cmile.nosp@m.s@uw.nosp@m..edu)