Chunk.cc File Reference

#include <protocols/nonlocal/Chunk.hh>
#include <boost/scoped_ptr.hpp>
#include <boost/accumulators/accumulators.hpp>
#include <boost/accumulators/statistics/mean.hpp>
#include <boost/accumulators/statistics/stats.hpp>
#include <boost/accumulators/statistics/variance.hpp>
#include <boost/math/distributions/normal.hpp>
#include <numeric/random/DistributionSampler.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <core/types.hh>
#include <core/kinematics/MoveMap.hh>
#include <protocols/nonlocal/Region.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::nonlocal

Macros
#define	SALT   0.00000001
	A small, positive value added to the standard deviation of each chunk. The distribution requires its standard deviation to be strictly positive. More...
#define	SD_MULTIPLIER   1.0
	A multiplicative factor applied to control the width of the normal distribution. Affects the width of the distribution. More...

Typedefs
typedef boost::math::normal	protocols::nonlocal::Normal

Detailed Description

Author

Christopher Miles (cmile.nosp@m.s@uw.nosp@m..edu)

Macro Definition Documentation

#define SALT   0.00000001

A small, positive value added to the standard deviation of each chunk. The distribution requires its standard deviation to be strictly positive.

Referenced by protocols::nonlocal::Chunk::Chunk().

#define SD_MULTIPLIER   1.0

A multiplicative factor applied to control the width of the normal distribution. Affects the width of the distribution.

Referenced by protocols::nonlocal::Chunk::Chunk().