SeqprofConsensusOperation.cc File Reference

set designable residues to those observed in sequence profile More...

#include <protocols/toolbox/task_operations/SeqprofConsensusOperation.hh>
#include <protocols/toolbox/task_operations/SeqprofConsensusOperationCreator.hh>
#include <protocols/toolbox/task_operations/ProteinInterfaceDesignOperation.hh>
#include <protocols/toolbox/task_operations/RestrictToAlignedSegments.hh>
#include <core/pack/task/TaskFactory.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/Tracer.hh>
#include <core/chemical/AA.hh>
#include <core/chemical/ResidueType.hh>
#include <core/conformation/symmetry/SymmetricConformation.hh>
#include <core/conformation/symmetry/SymmetryInfo.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pose/Pose.hh>
#include <core/pose/symmetry/util.hh>
#include <core/sequence/SequenceProfile.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/constraints/Constraint.hh>
#include <core/scoring/constraints/SequenceProfileConstraint.hh>
#include <core/io/ddg/PositionDdGInfo.hh>
#include <utility/string_util.hh>
#include <utility/file/file_sys_util.hh>
#include <utility/tag/Tag.hh>
#include <utility/vector1.hh>
#include <string>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <utility/vector0.hh>
#include <boost/foreach.hpp>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::toolbox
	protocols::toolbox::task_operations

Functions
static thread_local basic::Tracer	tr ("protocols.toolbox.task_operations.SeqprofConsensusOperation")

Detailed Description

set designable residues to those observed in sequence profile

Author

Florian Richter, flori.nosp@m.c@u..nosp@m.washi.nosp@m.ngto.nosp@m.n.edu, april 2011

Function Documentation

static thread_local basic::Tracer tr ( "protocols.toolbox.task_operations.SeqprofConsensusOperation"  )

static