Neighborhood.hh File Reference

#include <utility/pointer/ReferenceCount.hh>
#include <core/pose/Pose.hh>
#include <utility/vector1.hh>
#include <core/types.hh>

Classes
class	protocols::neighbor::Neighborhood
	A class to determine the neighborhood of a set of residues within a pose. More...

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::neighbor

Typedefs
typedef bool(*	protocols::neighbor::NGB_FUN_PTR )(Residue const &r1, Residue const &r2, Pose const &ps)
	type of functions that determine whether two residues are neighbor of one another More...

Functions
bool	protocols::neighbor::in_nrg_graph (Residue const &r1, Residue const &r2, Pose const &ps)
	: returns true iff r2 is a residue whose node in the energy graph is connected to r1's. More...
bool	protocols::neighbor::in_ngbat_sphere (Residue const &r1, Residue const &r2, Pose const &)
	: returns true iff r2's neighbor atom falls within a cutoff distance of r1's neighbor atom. More...