StepWiseModeler.cc File Reference

#include <protocols/stepwise/modeler/StepWiseModeler.hh>
#include <protocols/stepwise/modeler/StepWiseConnectionSampler.hh>
#include <protocols/stepwise/modeler/StepWiseMinimizer.hh>
#include <protocols/stepwise/modeler/util.hh>
#include <protocols/stepwise/modeler/scoring_util.hh>
#include <protocols/stepwise/modeler/align/util.hh>
#include <protocols/stepwise/modeler/options/StepWiseModelerOptions.hh>
#include <protocols/stepwise/modeler/packer/StepWiseMasterPacker.hh>
#include <protocols/stepwise/modeler/packer/StepWisePacker.hh>
#include <protocols/stepwise/modeler/packer/util.hh>
#include <protocols/stepwise/modeler/protein/util.hh>
#include <protocols/stepwise/modeler/protein/InputStreamWithResidueInfo.hh>
#include <protocols/stepwise/modeler/rna/util.hh>
#include <protocols/stepwise/modeler/working_parameters/StepWiseWorkingParameters.hh>
#include <protocols/stepwise/modeler/working_parameters/util.hh>
#include <protocols/stepwise/modeler/align/StepWiseLegacyClusterer.hh>
#include <protocols/stepwise/modeler/align/StepWisePoseAligner.hh>
#include <protocols/stepwise/modeler/precomputed/PrecomputedLibraryMover.hh>
#include <protocols/stepwise/monte_carlo/util.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/full_model_info/util.hh>
#include <core/pose/full_model_info/FullModelInfo.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/ScoreFunction.hh>
#include <utility/stream_util.hh>
#include <utility/tools/make_vector1.hh>
#include <ObjexxFCL/string.functions.hh>
#include <ObjexxFCL/format.hh>
#include <basic/Tracer.hh>
#include <protocols/stepwise/modeler/protein/loop_close/StepWiseProteinCCD_Closer.hh>
#include <protocols/stepwise/modeler/rna/checker/RNA_ChainClosableGeometryChecker.hh>
#include <protocols/stepwise/modeler/rna/checker/RNA_ChainClosureChecker.hh>
#include <protocols/stepwise/screener/StepWiseScreener.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::stepwise
	protocols::stepwise::modeler

Functions
static thread_local basic::Tracer	TR ("protocols.stepwise.modeler.StepWiseModeler")

Detailed Description

Author

Rhiju Das, rhiju.nosp@m.@sta.nosp@m.nford.nosp@m..edu

Function Documentation

static thread_local basic::Tracer TR ( "protocols.stepwise.modeler.StepWiseModeler"  )

static